Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.36□□□□□ -0.27
NF1P21359 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.36□□□□□ -0.27
NF1P21359 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.36□□□□□ -0.27
NF1P21359 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.36□□□□□ -0.27
NF1P21359 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.36□□□□□ -0.27
NF1P21359 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.36□□□□□ -0.27
NF1P21359 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NF1P21359 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
NF1P21359 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NF1P21359 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 SERBP1P3-201ENST00000459980 809 ntBASIC13.35□□□□□ -0.27
NF1P21359 AC092337.1-201ENST00000568699 1129 ntBASIC13.35□□□□□ -0.27
NF1P21359 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 AC007613.1-201ENST00000572811 2597 ntBASIC13.35□□□□□ -0.27
NF1P21359 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.35□□□□□ -0.27
NF1P21359 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 RN7SL560P-201ENST00000577943 264 ntBASIC13.35□□□□□ -0.27
NF1P21359 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.35□□□□□ -0.27
NF1P21359 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.35□□□□□ -0.27
NF1P21359 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 FAM220BP-201ENST00000377689 816 ntBASIC13.35□□□□□ -0.27
NF1P21359 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
NF1P21359 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 AC005695.3-201ENST00000614522 232 ntBASIC13.35□□□□□ -0.27
NF1P21359 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.35□□□□□ -0.27
NF1P21359 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
NF1P21359 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
NF1P21359 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NF1P21359 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.34□□□□□ -0.27
NF1P21359 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.34□□□□□ -0.27
NF1P21359 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.34□□□□□ -0.27
NF1P21359 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.34□□□□□ -0.27
NF1P21359 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.34□□□□□ -0.27
NF1P21359 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.34□□□□□ -0.27
NF1P21359 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NF1P21359 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.34□□□□□ -0.27
NF1P21359 AC005077.2-201ENST00000449786 690 ntBASIC13.34□□□□□ -0.27
NF1P21359 AL589987.1-201ENST00000453380 819 ntBASIC13.34□□□□□ -0.27
NF1P21359 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NF1P21359 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms