Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN3P20807 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CAPN3P20807 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPN3P20807 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPN3P20807 AC074051.2-201ENST00000565115 352 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPN3P20807 AC013467.2-201ENST00000605472 835 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 AP000867.4-201ENST00000641616 219 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 AL596087.1-201ENST00000400979 1969 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN3P20807 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN3P20807 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPN3P20807 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 AC233702.3-201ENST00000578656 1387 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 AC103702.1-201ENST00000548801 2630 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CAPN3P20807 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 RCN1P2-201ENST00000398357 915 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 LINC00982-205ENST00000420957 435 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 AC093909.1-201ENST00000504731 1122 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.11■□□□□ 0.17
CAPN3P20807 AC096582.2-201ENST00000510860 516 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN3P20807 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 AL773604.1-201ENST00000617417 272 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.11■□□□□ 0.17
CAPN3P20807 AL139011.1-202ENST00000642063 584 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN3P20807 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN3P20807 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 GGT3P-204ENST00000453783 1664 ntBASIC16.11■□□□□ 0.17
CAPN3P20807 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN3P20807 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN3P20807 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN3P20807 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CAPN3P20807 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN3P20807 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN3P20807 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN3P20807 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms