Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL512652.2-201ENST00000625156 1716 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AL118508.1-201ENST00000613502 2345 ntBASIC16.85■□□□□ 0.29
HLA-DPA1P20036 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AC007064.4-201ENST00000637740 555 ntBASIC16.85■□□□□ 0.29
HLA-DPA1P20036 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DPA1P20036 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DPA1P20036 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DPA1P20036 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.29
HLA-DPA1P20036 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DPA1P20036 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 HMGA1P7-201ENST00000406908 502 ntBASIC16.83■□□□□ 0.28
HLA-DPA1P20036 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DPA1P20036 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms