Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.92■□□□□ 0.46
CD58P19256 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.92■□□□□ 0.46
CD58P19256 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.92■□□□□ 0.46
CD58P19256 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.92■□□□□ 0.46
CD58P19256 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.92■□□□□ 0.46
CD58P19256 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.92■□□□□ 0.46
CD58P19256 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.92■□□□□ 0.46
CD58P19256 AL031432.2-201ENST00000566714 459 ntBASIC17.92■□□□□ 0.46
CD58P19256 AL928711.1-201ENST00000570165 459 ntBASIC17.92■□□□□ 0.46
CD58P19256 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.92■□□□□ 0.46
CD58P19256 AL645728.2-201ENST00000641974 660 ntBASIC17.92■□□□□ 0.46
CD58P19256 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.92■□□□□ 0.46
CD58P19256 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.92■□□□□ 0.46
CD58P19256 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD58P19256 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.91■□□□□ 0.46
CD58P19256 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CD58P19256 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CD58P19256 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.91■□□□□ 0.46
CD58P19256 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 PGAM5P1-201ENST00000518923 814 ntBASIC17.91■□□□□ 0.46
CD58P19256 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.91■□□□□ 0.46
CD58P19256 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.91■□□□□ 0.46
CD58P19256 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 PCDHB19P-201ENST00000570871 2371 ntBASIC17.91■□□□□ 0.46
CD58P19256 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CD58P19256 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.91■□□□□ 0.46
CD58P19256 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 PMS2P7-201ENST00000506558 1336 ntBASIC17.91■□□□□ 0.46
CD58P19256 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.91■□□□□ 0.46
CD58P19256 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD58P19256 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD58P19256 AC092919.2-201ENST00000623631 1645 ntBASIC17.9■□□□□ 0.46
CD58P19256 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.9■□□□□ 0.46
CD58P19256 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.9■□□□□ 0.46
CD58P19256 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.9■□□□□ 0.46
CD58P19256 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 PDPK2P-202ENST00000562415 1191 ntBASIC17.9■□□□□ 0.46
CD58P19256 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.9■□□□□ 0.46
CD58P19256 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.9■□□□□ 0.46
CD58P19256 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD58P19256 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.9■□□□□ 0.46
CD58P19256 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD58P19256 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms