Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
KRT4P19013 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT4P19013 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KRT4P19013 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
KRT4P19013 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 LINC00982-205ENST00000420957 435 ntBASIC16.8■□□□□ 0.28
KRT4P19013 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT4P19013 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.8■□□□□ 0.28
KRT4P19013 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT4P19013 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
KRT4P19013 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT4P19013 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KRT4P19013 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT4P19013 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRT4P19013 AC023824.1-201ENST00000562945 2975 ntBASIC16.8■□□□□ 0.28
KRT4P19013 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 AC126177.1-201ENST00000547829 2218 ntBASIC16.8■□□□□ 0.28
KRT4P19013 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT4P19013 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 AC002310.6-201ENST00000624451 1377 ntBASIC16.79■□□□□ 0.28
KRT4P19013 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT4P19013 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT4P19013 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT4P19013 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KRT4P19013 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT4P19013 AC022616.7-201ENST00000525383 220 ntBASIC16.79■□□□□ 0.28
KRT4P19013 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT4P19013 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.79■□□□□ 0.28
KRT4P19013 NTF6B-201ENST00000591913 560 ntBASIC16.79■□□□□ 0.28
KRT4P19013 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT4P19013 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT4P19013 AP000867.4-201ENST00000641616 219 ntBASIC16.79■□□□□ 0.28
KRT4P19013 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT4P19013 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT4P19013 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT4P19013 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT4P19013 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 AC243591.1-201ENST00000452967 1364 ntBASIC16.78■□□□□ 0.28
KRT4P19013 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT4P19013 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT4P19013 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT4P19013 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT4P19013 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms