Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 GPALPP1-207ENST00000611650 899 ntBASIC16.69■□□□□ 0.26
XRCC1P18887 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC1P18887 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
XRCC1P18887 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 HYMAI-201ENST00000635591 3347 ntBASIC16.69■□□□□ 0.26
XRCC1P18887 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC1P18887 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC1P18887 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
XRCC1P18887 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 CYP2T1P-202ENST00000641596 2535 ntBASIC16.68■□□□□ 0.26
XRCC1P18887 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC1P18887 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
XRCC1P18887 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 IGLL3P-201ENST00000412472 434 ntBASIC16.68■□□□□ 0.26
XRCC1P18887 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.68■□□□□ 0.26
XRCC1P18887 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.68■□□□□ 0.26
XRCC1P18887 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
XRCC1P18887 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC1P18887 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC1P18887 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.68■□□□□ 0.26
XRCC1P18887 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC1P18887 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC1P18887 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC1P18887 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 AC002310.6-201ENST00000624451 1377 ntBASIC16.67■□□□□ 0.26
XRCC1P18887 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 YBX2P1-201ENST00000394192 760 ntBASIC16.67■□□□□ 0.26
XRCC1P18887 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.67■□□□□ 0.26
XRCC1P18887 AC023274.1-201ENST00000418278 595 ntBASIC16.67■□□□□ 0.26
XRCC1P18887 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 DNAJB3-201ENST00000446806 729 ntBASIC16.67■□□□□ 0.26
XRCC1P18887 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 AC096734.2-201ENST00000562054 433 ntBASIC16.67■□□□□ 0.26
XRCC1P18887 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.67■□□□□ 0.26
XRCC1P18887 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC1P18887 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC1P18887 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
XRCC1P18887 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms