Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL3L1P16619 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL3L1P16619 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL3L1P16619 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CCL3L1P16619 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL3L1P16619 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 PDPK2P-202ENST00000562415 1191 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 AC040169.1-201ENST00000565382 521 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.78□□□□□ -0.2
CCL3L1P16619 AC092919.2-201ENST00000623631 1645 ntBASIC13.78□□□□□ -0.2
CCL3L1P16619 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL3L1P16619 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL3L1P16619 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL3L1P16619 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL3L1P16619 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.77□□□□□ -0.2
CCL3L1P16619 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CCL3L1P16619 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.77□□□□□ -0.2
CCL3L1P16619 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL3L1P16619 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CCL3L1P16619 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL3L1P16619 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CCL3L1P16619 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL3L1P16619 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CCL3L1P16619 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL3L1P16619 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL3L1P16619 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.77□□□□□ -0.21
CCL3L1P16619 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL3L1P16619 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL3L1P16619 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.77□□□□□ -0.21
CCL3L1P16619 AC006538.1-201ENST00000567905 1585 ntBASIC13.77□□□□□ -0.21
CCL3L1P16619 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL3L1P16619 AL031055.1-201ENST00000606362 631 ntBASIC13.77□□□□□ -0.21
CCL3L1P16619 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.77□□□□□ -0.21
CCL3L1P16619 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL3L1P16619 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL3L1P16619 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL3L1P16619 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCL3L1P16619 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL3L1P16619 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL3L1P16619 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 AL512652.2-201ENST00000625156 1716 ntBASIC13.76□□□□□ -0.21
CCL3L1P16619 KRT8P39-201ENST00000396270 1433 ntBASIC13.76□□□□□ -0.21
CCL3L1P16619 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCL3L1P16619 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCL3L1P16619 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCL3L1P16619 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL3L1P16619 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCL3L1P16619 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 RNU1-129P-201ENST00000384064 167 ntBASIC13.76□□□□□ -0.21
CCL3L1P16619 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL3L1P16619 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL3L1P16619 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL3L1P16619 AC074386.1-202ENST00000463561 864 ntBASIC13.76□□□□□ -0.21
CCL3L1P16619 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL3L1P16619 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms