Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.16■□□□□ 0.66
BMP3P12645 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
BMP3P12645 HLA-H-201ENST00000383620 1096 ntBASIC19.16■□□□□ 0.66
BMP3P12645 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 AC069120.2-201ENST00000524091 540 ntBASIC19.16■□□□□ 0.66
BMP3P12645 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.16■□□□□ 0.66
BMP3P12645 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.16■□□□□ 0.66
BMP3P12645 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.16■□□□□ 0.66
BMP3P12645 AC003101.2-201ENST00000612557 442 ntBASIC19.16■□□□□ 0.66
BMP3P12645 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 AC005915.1-201ENST00000624912 2018 ntBASIC19.16■□□□□ 0.66
BMP3P12645 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.16■□□□□ 0.66
BMP3P12645 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP3P12645 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.16■□□□□ 0.66
BMP3P12645 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 BASP1P1-201ENST00000430708 665 ntBASIC19.15■□□□□ 0.66
BMP3P12645 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.15■□□□□ 0.66
BMP3P12645 AL158211.3-201ENST00000607385 239 ntBASIC19.15■□□□□ 0.66
BMP3P12645 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 AL031731.1-201ENST00000642131 2094 ntBASIC19.15■□□□□ 0.66
BMP3P12645 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.15■□□□□ 0.66
BMP3P12645 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BMP3P12645 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP3P12645 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BMP3P12645 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.14■□□□□ 0.66
BMP3P12645 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BMP3P12645 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 FAM220BP-201ENST00000377689 816 ntBASIC19.14■□□□□ 0.65
BMP3P12645 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.14■□□□□ 0.65
BMP3P12645 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.14■□□□□ 0.65
BMP3P12645 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 AC098859.1-201ENST00000502915 1238 ntBASIC19.14■□□□□ 0.65
BMP3P12645 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 IGHV3-42-201ENST00000520410 361 ntBASIC19.14■□□□□ 0.65
BMP3P12645 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.14■□□□□ 0.65
BMP3P12645 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.14■□□□□ 0.65
BMP3P12645 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.14■□□□□ 0.65
BMP3P12645 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.14■□□□□ 0.65
BMP3P12645 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 AC020765.3-201ENST00000613051 740 ntBASIC19.14■□□□□ 0.65
BMP3P12645 AC105020.1-201ENST00000435356 2205 ntBASIC19.14■□□□□ 0.65
BMP3P12645 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
BMP3P12645 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BMP3P12645 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.14■□□□□ 0.65
BMP3P12645 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BMP3P12645 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 GPAA1P2-202ENST00000606848 1787 ntBASIC19.14■□□□□ 0.65
BMP3P12645 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP3P12645 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.13■□□□□ 0.65
BMP3P12645 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP3P12645 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
BMP3P12645 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
BMP3P12645 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP3P12645 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP3P12645 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP3P12645 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
BMP3P12645 AC097493.3-201ENST00000509725 367 ntBASIC19.13■□□□□ 0.65
BMP3P12645 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.13■□□□□ 0.65
BMP3P12645 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms