Protein–RNA interactions for Protein: P0C0L4

C4A, Complement C4-A, humanhuman

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4AP0C0L4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.65■□□□□ 0.9
C4AP0C0L4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
C4AP0C0L4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C4AP0C0L4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C4AP0C0L4 SPDYE17-201ENST00000412399 783 ntBASIC20.65■□□□□ 0.9
C4AP0C0L4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.65■□□□□ 0.9
C4AP0C0L4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.65■□□□□ 0.9
C4AP0C0L4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.65■□□□□ 0.9
C4AP0C0L4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.65■□□□□ 0.9
C4AP0C0L4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
C4AP0C0L4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.65■□□□□ 0.9
C4AP0C0L4 GGT4P-201ENST00000623672 1708 ntBASIC20.65■□□□□ 0.9
C4AP0C0L4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.65■□□□□ 0.9
C4AP0C0L4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
C4AP0C0L4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C4AP0C0L4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
C4AP0C0L4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
C4AP0C0L4 CROCCP4-201ENST00000457096 498 ntBASIC20.64■□□□□ 0.9
C4AP0C0L4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.64■□□□□ 0.9
C4AP0C0L4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C4AP0C0L4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.64■□□□□ 0.89
C4AP0C0L4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 AC025048.3-201ENST00000590609 569 ntBASIC20.64■□□□□ 0.89
C4AP0C0L4 AC084346.2-201ENST00000607097 949 ntBASIC20.64■□□□□ 0.89
C4AP0C0L4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.64■□□□□ 0.89
C4AP0C0L4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C4AP0C0L4 AC005702.4-201ENST00000618393 416 ntBASIC20.64■□□□□ 0.89
C4AP0C0L4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
C4AP0C0L4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.64■□□□□ 0.89
C4AP0C0L4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
C4AP0C0L4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
C4AP0C0L4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
C4AP0C0L4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
C4AP0C0L4 AC139713.2-201ENST00000641328 2723 ntBASIC20.63■□□□□ 0.89
C4AP0C0L4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.63■□□□□ 0.89
C4AP0C0L4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.63■□□□□ 0.89
C4AP0C0L4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
C4AP0C0L4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.63■□□□□ 0.89
C4AP0C0L4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.63■□□□□ 0.89
C4AP0C0L4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 AC074044.1-201ENST00000609673 707 ntBASIC20.63■□□□□ 0.89
C4AP0C0L4 AC133552.6-201ENST00000613406 534 ntBASIC20.63■□□□□ 0.89
C4AP0C0L4 AL133338.1-201ENST00000565695 1517 ntBASIC20.63■□□□□ 0.89
C4AP0C0L4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
C4AP0C0L4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4AP0C0L4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.62■□□□□ 0.89
C4AP0C0L4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4AP0C0L4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.62■□□□□ 0.89
C4AP0C0L4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4AP0C0L4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
C4AP0C0L4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4AP0C0L4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4AP0C0L4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C4AP0C0L4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.62■□□□□ 0.89
C4AP0C0L4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.62■□□□□ 0.89
C4AP0C0L4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.62■□□□□ 0.89
C4AP0C0L4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.62■□□□□ 0.89
C4AP0C0L4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms