Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DOAP06340 AC060834.1-201ENST00000443027 2032 ntBASIC19.58■□□□□ 0.72
HLA-DOAP06340 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.57■□□□□ 0.72
HLA-DOAP06340 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 AL645728.1-201ENST00000366221 2101 ntBASIC19.57■□□□□ 0.72
HLA-DOAP06340 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DOAP06340 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DOAP06340 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 FAM220BP-201ENST00000377689 816 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 AL035633.1-201ENST00000406139 838 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 AL353705.2-201ENST00000428243 662 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 AC092580.3-201ENST00000430932 139 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 AC098859.1-201ENST00000502915 1238 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 AC073592.8-201ENST00000624126 511 ntBASIC19.56■□□□□ 0.72
HLA-DOAP06340 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HLA-DOAP06340 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DOAP06340 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DOAP06340 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DOAP06340 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DOAP06340 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOAP06340 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOAP06340 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DOAP06340 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms