Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
HLA-DPB1P04440 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 TP73-AS1-210ENST00000637775 1455 ntBASIC15.08■□□□□ 0
HLA-DPB1P04440 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DPB1P04440 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
HLA-DPB1P04440 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.07■□□□□ 0
HLA-DPB1P04440 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DPB1P04440 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DPB1P04440 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 AC009533.2-201ENST00000543664 586 ntBASIC15.07■□□□□ 0
HLA-DPB1P04440 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.07■□□□□ 0
HLA-DPB1P04440 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.07■□□□□ 0
HLA-DPB1P04440 BNIP3P18-201ENST00000593976 575 ntBASIC15.07■□□□□ 0
HLA-DPB1P04440 AC138894.3-201ENST00000603787 634 ntBASIC15.07■□□□□ 0
HLA-DPB1P04440 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 AC092384.3-202ENST00000564646 2873 ntBASIC15.07■□□□□ 0
HLA-DPB1P04440 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.07■□□□□ 0
HLA-DPB1P04440 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HLA-DPB1P04440 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HLA-DPB1P04440 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HLA-DPB1P04440 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DPB1P04440 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HLA-DPB1P04440 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DPB1P04440 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.06■□□□□ 0
HLA-DPB1P04440 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DPB1P04440 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.06■□□□□ 0
HLA-DPB1P04440 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.06■□□□□ 0
HLA-DPB1P04440 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HLA-DPB1P04440 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.06■□□□□ 0
HLA-DPB1P04440 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms