Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC10.2□□□□□ -0.78
APOBP04114 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.2□□□□□ -0.78
APOBP04114 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 AC116353.5-201ENST00000638148 1699 ntBASIC10.2□□□□□ -0.78
APOBP04114 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.2□□□□□ -0.78
APOBP04114 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 CNN2P8-201ENST00000421872 913 ntBASIC10.2□□□□□ -0.78
APOBP04114 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOBP04114 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.19□□□□□ -0.78
APOBP04114 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.19□□□□□ -0.78
APOBP04114 SPCS2P2-201ENST00000603270 608 ntBASIC10.19□□□□□ -0.78
APOBP04114 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 BOLA2P3-201ENST00000404566 256 ntBASIC10.19□□□□□ -0.78
APOBP04114 AC026954.1-201ENST00000429771 1293 ntBASIC10.19□□□□□ -0.78
APOBP04114 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.19□□□□□ -0.78
APOBP04114 APRT-204ENST00000563655 709 ntTSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 MIR4706-201ENST00000582134 82 ntBASIC10.19□□□□□ -0.78
APOBP04114 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.19□□□□□ -0.78
APOBP04114 LINC01115-203ENST00000606068 577 ntBASIC10.19□□□□□ -0.78
APOBP04114 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.19□□□□□ -0.78
APOBP04114 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 AC004408.2-201ENST00000623613 2777 ntBASIC10.19□□□□□ -0.78
APOBP04114 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 AL031731.1-201ENST00000642131 2094 ntBASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.19□□□□□ -0.78
APOBP04114 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 RN7SL399P-201ENST00000471648 279 ntBASIC10.19□□□□□ -0.78
APOBP04114 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 FAM86LP-201ENST00000478302 853 ntBASIC10.19□□□□□ -0.78
APOBP04114 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.19□□□□□ -0.78
APOBP04114 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
APOBP04114 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.19□□□□□ -0.78
APOBP04114 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
APOBP04114 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms