Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.56■□□□□ 0.56
CLSTN1O94985 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.56■□□□□ 0.56
CLSTN1O94985 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 MRPL3P1-201ENST00000400109 1033 ntBASIC18.56■□□□□ 0.56
CLSTN1O94985 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.56■□□□□ 0.56
CLSTN1O94985 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.56■□□□□ 0.56
CLSTN1O94985 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.56■□□□□ 0.56
CLSTN1O94985 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLSTN1O94985 AP001005.1-201ENST00000571755 1248 ntBASIC18.56■□□□□ 0.56
CLSTN1O94985 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLSTN1O94985 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.56■□□□□ 0.56
CLSTN1O94985 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLSTN1O94985 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLSTN1O94985 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLSTN1O94985 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLSTN1O94985 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.55■□□□□ 0.56
CLSTN1O94985 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 PCDHB19P-201ENST00000570871 2371 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 ELK2BP-201ENST00000415014 1224 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 AL031284.1-201ENST00000419297 478 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 ACTG1P4-201ENST00000425123 1122 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.55■□□□□ 0.56
CLSTN1O94985 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.55■□□□□ 0.56
CLSTN1O94985 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 AL662844.1-201ENST00000546340 181 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.55■□□□□ 0.56
CLSTN1O94985 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.55■□□□□ 0.56
CLSTN1O94985 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.55■□□□□ 0.56
CLSTN1O94985 AC107918.4-202ENST00000641623 219 ntBASIC18.55■□□□□ 0.56
CLSTN1O94985 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLSTN1O94985 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
CLSTN1O94985 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLSTN1O94985 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLSTN1O94985 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLSTN1O94985 AC026396.1-201ENST00000419388 421 ntBASIC18.54■□□□□ 0.56
CLSTN1O94985 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.54■□□□□ 0.56
CLSTN1O94985 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 AL139424.1-201ENST00000607572 797 ntBASIC18.54■□□□□ 0.56
CLSTN1O94985 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.54■□□□□ 0.56
CLSTN1O94985 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.54■□□□□ 0.56
CLSTN1O94985 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLSTN1O94985 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.54■□□□□ 0.56
CLSTN1O94985 EGFEM1P-202ENST00000431685 1563 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms