Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.39■□□□□ 0.7
CTNND1O60716 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CTNND1O60716 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.39■□□□□ 0.69
CTNND1O60716 MTND6P24-201ENST00000440466 518 ntBASIC19.39■□□□□ 0.69
CTNND1O60716 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNND1O60716 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 AC105021.1-202ENST00000570572 669 ntBASIC19.39■□□□□ 0.69
CTNND1O60716 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.39■□□□□ 0.69
CTNND1O60716 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 AL844908.2-201ENST00000609461 460 ntBASIC19.39■□□□□ 0.69
CTNND1O60716 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.39■□□□□ 0.69
CTNND1O60716 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTNND1O60716 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTNND1O60716 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 SNX33P1-201ENST00000592116 1762 ntBASIC19.39■□□□□ 0.69
CTNND1O60716 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CTNND1O60716 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.39■□□□□ 0.69
CTNND1O60716 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTNND1O60716 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTNND1O60716 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.38■□□□□ 0.69
CTNND1O60716 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.38■□□□□ 0.69
CTNND1O60716 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.38■□□□□ 0.69
CTNND1O60716 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.38■□□□□ 0.69
CTNND1O60716 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.38■□□□□ 0.69
CTNND1O60716 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CTNND1O60716 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 BANF1P1-201ENST00000553684 263 ntBASIC19.38■□□□□ 0.69
CTNND1O60716 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.38■□□□□ 0.69
CTNND1O60716 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 AC008738.7-201ENST00000609744 511 ntBASIC19.38■□□□□ 0.69
CTNND1O60716 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.38■□□□□ 0.69
CTNND1O60716 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTNND1O60716 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.38■□□□□ 0.69
CTNND1O60716 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
CTNND1O60716 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.37■□□□□ 0.69
CTNND1O60716 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTNND1O60716 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CTNND1O60716 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.37■□□□□ 0.69
CTNND1O60716 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTNND1O60716 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.37■□□□□ 0.69
CTNND1O60716 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.37■□□□□ 0.69
CTNND1O60716 RN7SL692P-201ENST00000464677 288 ntBASIC19.37■□□□□ 0.69
CTNND1O60716 RNA5SP410-201ENST00000516285 106 ntBASIC19.37■□□□□ 0.69
CTNND1O60716 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.37■□□□□ 0.69
CTNND1O60716 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.37■□□□□ 0.69
CTNND1O60716 AL133215.2-201ENST00000609242 977 ntBASIC19.37■□□□□ 0.69
CTNND1O60716 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 585.4 ms