Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.95■□□□□ 0.14
LCMT2O60294 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 PMS2P4-201ENST00000412466 1052 ntBASIC15.95■□□□□ 0.14
LCMT2O60294 MCCD1P2-201ENST00000423228 335 ntBASIC15.95■□□□□ 0.14
LCMT2O60294 AC092474.2-201ENST00000424288 719 ntBASIC15.95■□□□□ 0.14
LCMT2O60294 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.95■□□□□ 0.14
LCMT2O60294 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.95■□□□□ 0.14
LCMT2O60294 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.95■□□□□ 0.14
LCMT2O60294 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LCMT2O60294 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.95■□□□□ 0.14
LCMT2O60294 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LCMT2O60294 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.95■□□□□ 0.14
LCMT2O60294 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
LCMT2O60294 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.95■□□□□ 0.14
LCMT2O60294 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 YBX2P1-201ENST00000394192 760 ntBASIC15.94■□□□□ 0.14
LCMT2O60294 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LCMT2O60294 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.94■□□□□ 0.14
LCMT2O60294 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
LCMT2O60294 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 TNRC18P3-201ENST00000441896 2691 ntBASIC15.94■□□□□ 0.14
LCMT2O60294 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LCMT2O60294 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LCMT2O60294 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
LCMT2O60294 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LCMT2O60294 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.93■□□□□ 0.14
LCMT2O60294 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.93■□□□□ 0.14
LCMT2O60294 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.93■□□□□ 0.14
LCMT2O60294 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.93■□□□□ 0.14
LCMT2O60294 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.93■□□□□ 0.14
LCMT2O60294 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.93■□□□□ 0.14
LCMT2O60294 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.93■□□□□ 0.14
LCMT2O60294 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms