Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHMP2AO43633 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.76■□□□□ 0.59
CHMP2AO43633 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 AD000864.1-201ENST00000624076 2295 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 TFAMP1-201ENST00000412727 736 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 SPDYE11-202ENST00000450699 704 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 SPDYE9P-201ENST00000570642 692 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 SPDYE10P-202ENST00000612005 668 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 SPDYE8P-202ENST00000612377 668 ntBASIC18.75■□□□□ 0.59
CHMP2AO43633 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP2AO43633 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHMP2AO43633 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
CHMP2AO43633 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP2AO43633 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 AC254562.1-201ENST00000417586 456 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP2AO43633 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.74■□□□□ 0.59
CHMP2AO43633 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CHMP2AO43633 MIR3909-201ENST00000579518 119 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP2AO43633 AC022145.2-201ENST00000598203 171 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP2AO43633 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 AC026120.1-201ENST00000611536 926 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 AC105339.1-204ENST00000636249 355 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 KRT8P39-201ENST00000396270 1433 ntBASIC18.74■□□□□ 0.59
CHMP2AO43633 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CHMP2AO43633 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP2AO43633 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
CHMP2AO43633 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 AC011676.5-201ENST00000624864 2660 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP2AO43633 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2AO43633 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2AO43633 AC004461.1-201ENST00000412461 403 ntBASIC18.73■□□□□ 0.59
CHMP2AO43633 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms