Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 PRORSD1P-202ENST00000563365 2154 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 MIR346-201ENST00000362234 95 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 KRT18P32-201ENST00000424695 1287 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.81■□□□□ 0.28
SMAD6O43541 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.81■□□□□ 0.28
SMAD6O43541 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.81■□□□□ 0.28
SMAD6O43541 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.81■□□□□ 0.28
SMAD6O43541 SLC25A39P2-201ENST00000537614 270 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 KRT8P23-201ENST00000560090 1207 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 AP000842.3-202ENST00000569238 1080 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 AC027796.2-201ENST00000575326 344 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.81■□□□□ 0.28
SMAD6O43541 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.81■□□□□ 0.28
SMAD6O43541 LINC00628-201ENST00000628516 1289 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 AC084121.4-201ENST00000641598 221 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 AF228730.8-201ENST00000642140 221 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 HLA-A-202ENST00000376806 1854 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD6O43541 AD000864.1-201ENST00000624076 2295 ntBASIC16.81■□□□□ 0.28
SMAD6O43541 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD6O43541 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
SMAD6O43541 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD6O43541 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMAD6O43541 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SMAD6O43541 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.8■□□□□ 0.28
SMAD6O43541 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD6O43541 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.8■□□□□ 0.28
SMAD6O43541 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD6O43541 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
SMAD6O43541 AGGF1P2-201ENST00000426656 2106 ntBASIC16.79■□□□□ 0.28
SMAD6O43541 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
SMAD6O43541 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMAD6O43541 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms