Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RPL23AP68-201ENST00000480924 445 ntBASIC23.12■■□□□ 1.29
MSH5O43196 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.12■■□□□ 1.29
MSH5O43196 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 AC010627.1-201ENST00000503819 1294 ntBASIC23.12■■□□□ 1.29
MSH5O43196 AC119751.5-201ENST00000514077 770 ntBASIC23.12■■□□□ 1.29
MSH5O43196 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.12■■□□□ 1.29
MSH5O43196 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
MSH5O43196 CDH13-207ENST00000565636 810 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC23.12■■□□□ 1.29
MSH5O43196 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 MTDHP4-201ENST00000600287 670 ntBASIC23.12■■□□□ 1.29
MSH5O43196 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
MSH5O43196 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.12■■□□□ 1.29
MSH5O43196 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.12■■□□□ 1.29
MSH5O43196 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
MSH5O43196 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 AC138028.4-201ENST00000564984 1845 ntBASIC23.11■■□□□ 1.29
MSH5O43196 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
MSH5O43196 NPM1P10-201ENST00000398310 865 ntBASIC23.11■■□□□ 1.29
MSH5O43196 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.11■■□□□ 1.29
MSH5O43196 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.11■■□□□ 1.29
MSH5O43196 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC23.11■■□□□ 1.29
MSH5O43196 AC108747.1-201ENST00000609508 535 ntBASIC23.11■■□□□ 1.29
MSH5O43196 AC069234.5-201ENST00000611056 416 ntBASIC23.11■■□□□ 1.29
MSH5O43196 U6.48-201ENST00000618523 106 ntBASIC23.11■■□□□ 1.29
MSH5O43196 AL603839.4-201ENST00000624658 1005 ntBASIC23.11■■□□□ 1.29
MSH5O43196 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 AL163051.1-201ENST00000569214 1512 ntBASIC23.11■■□□□ 1.29
MSH5O43196 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
MSH5O43196 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 CROCCP2-202ENST00000412962 2773 ntBASIC23.11■■□□□ 1.29
MSH5O43196 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
MSH5O43196 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
MSH5O43196 PCDHA1-201ENST00000378133 2726 ntBASIC23.1■■□□□ 1.29
MSH5O43196 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH5O43196 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
MSH5O43196 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.1■■□□□ 1.29
MSH5O43196 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
MSH5O43196 KCTD10P1-201ENST00000434203 625 ntBASIC23.1■■□□□ 1.29
MSH5O43196 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC23.1■■□□□ 1.29
MSH5O43196 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC23.1■■□□□ 1.29
MSH5O43196 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.1■■□□□ 1.29
MSH5O43196 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH5O43196 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH5O43196 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.1■■□□□ 1.29
MSH5O43196 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC23.1■■□□□ 1.29
MSH5O43196 AC006116.5-201ENST00000591936 559 ntBASIC23.1■■□□□ 1.29
MSH5O43196 AC092364.2-202ENST00000597012 1073 ntBASIC23.1■■□□□ 1.29
MSH5O43196 AC011467.2-201ENST00000598425 242 ntBASIC23.1■■□□□ 1.29
MSH5O43196 AL353621.2-201ENST00000605340 133 ntBASIC23.1■■□□□ 1.29
MSH5O43196 FAM72A-208ENST00000607379 1139 ntBASIC23.1■■□□□ 1.29
MSH5O43196 AC068587.9-201ENST00000641814 219 ntBASIC23.1■■□□□ 1.29
MSH5O43196 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MSH5O43196 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms