Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 KRT18P32-201ENST00000424695 1287 ntBASIC21.12■□□□□ 0.97
ABCC4O15439 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCC4O15439 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCC4O15439 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCC4O15439 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCC4O15439 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCC4O15439 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ABCC4O15439 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ABCC4O15439 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCC4O15439 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
ABCC4O15439 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.11■□□□□ 0.97
ABCC4O15439 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ABCC4O15439 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 PMS2P4-201ENST00000412466 1052 ntBASIC21.11■□□□□ 0.97
ABCC4O15439 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.11■□□□□ 0.97
ABCC4O15439 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 AC067863.1-201ENST00000494933 530 ntBASIC21.11■□□□□ 0.97
ABCC4O15439 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.11■□□□□ 0.97
ABCC4O15439 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.11■□□□□ 0.97
ABCC4O15439 RARRES2P8-201ENST00000566335 367 ntBASIC21.11■□□□□ 0.97
ABCC4O15439 AC051619.7-201ENST00000568314 623 ntBASIC21.11■□□□□ 0.97
ABCC4O15439 MIR4745-201ENST00000577608 62 ntBASIC21.11■□□□□ 0.97
ABCC4O15439 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ABCC4O15439 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ABCC4O15439 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ABCC4O15439 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCC4O15439 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCC4O15439 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCC4O15439 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 ME2P1-201ENST00000426028 1970 ntBASIC21.1■□□□□ 0.97
ABCC4O15439 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCC4O15439 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.1■□□□□ 0.97
ABCC4O15439 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ABCC4O15439 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ABCC4O15439 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCC4O15439 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCC4O15439 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCC4O15439 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ABCC4O15439 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCC4O15439 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 AC092474.2-201ENST00000424288 719 ntBASIC21.09■□□□□ 0.97
ABCC4O15439 AC093214.1-201ENST00000511688 1107 ntBASIC21.09■□□□□ 0.97
ABCC4O15439 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCC4O15439 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCC4O15439 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 AC021097.1-201ENST00000607902 574 ntBASIC21.09■□□□□ 0.97
ABCC4O15439 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms