Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRANK1O15050 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.23■□□□□ 0.35
TRANK1O15050 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.23■□□□□ 0.35
TRANK1O15050 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRANK1O15050 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.23■□□□□ 0.35
TRANK1O15050 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRANK1O15050 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.23■□□□□ 0.35
TRANK1O15050 AC006033.1-201ENST00000440505 426 ntBASIC17.23■□□□□ 0.35
TRANK1O15050 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.23■□□□□ 0.35
TRANK1O15050 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.23■□□□□ 0.35
TRANK1O15050 GNRHR2-203ENST00000581100 1187 ntBASIC17.23■□□□□ 0.35
TRANK1O15050 AC026979.3-201ENST00000607315 403 ntBASIC17.23■□□□□ 0.35
TRANK1O15050 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.23■□□□□ 0.35
TRANK1O15050 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.23■□□□□ 0.35
TRANK1O15050 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRANK1O15050 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.22■□□□□ 0.35
TRANK1O15050 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 PP12613-201ENST00000424958 2230 ntBASIC17.22■□□□□ 0.35
TRANK1O15050 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRANK1O15050 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.22■□□□□ 0.35
TRANK1O15050 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.22■□□□□ 0.35
TRANK1O15050 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.22■□□□□ 0.35
TRANK1O15050 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 FAM86HP-204ENST00000513466 959 ntBASIC17.22■□□□□ 0.35
TRANK1O15050 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.22■□□□□ 0.35
TRANK1O15050 AC074044.1-201ENST00000609673 707 ntBASIC17.22■□□□□ 0.35
TRANK1O15050 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 MSTO2P-201ENST00000314835 1709 ntBASIC17.22■□□□□ 0.35
TRANK1O15050 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
TRANK1O15050 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRANK1O15050 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRANK1O15050 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRANK1O15050 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TRANK1O15050 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.21■□□□□ 0.35
TRANK1O15050 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.21■□□□□ 0.35
TRANK1O15050 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.21■□□□□ 0.35
TRANK1O15050 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.21■□□□□ 0.35
TRANK1O15050 AC025048.3-201ENST00000590609 569 ntBASIC17.21■□□□□ 0.35
TRANK1O15050 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRANK1O15050 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 AC105129.2-201ENST00000559536 390 ntBASIC17.21■□□□□ 0.35
TRANK1O15050 AL022328.1-201ENST00000610050 478 ntBASIC17.21■□□□□ 0.35
TRANK1O15050 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.21■□□□□ 0.35
TRANK1O15050 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.21■□□□□ 0.35
TRANK1O15050 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRANK1O15050 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRANK1O15050 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRANK1O15050 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.21■□□□□ 0.34
TRANK1O15050 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRANK1O15050 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 HIST3H2BA-201ENST00000436555 524 ntBASIC17.2■□□□□ 0.34
TRANK1O15050 RN7SL399P-201ENST00000471648 279 ntBASIC17.2■□□□□ 0.34
TRANK1O15050 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.2■□□□□ 0.34
TRANK1O15050 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRANK1O15050 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.2■□□□□ 0.34
TRANK1O15050 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.2■□□□□ 0.34
TRANK1O15050 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.2■□□□□ 0.34
TRANK1O15050 GGT4P-201ENST00000623672 1708 ntBASIC17.2■□□□□ 0.34
TRANK1O15050 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRANK1O15050 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.2■□□□□ 0.34
TRANK1O15050 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
TRANK1O15050 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.2■□□□□ 0.34
TRANK1O15050 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
TRANK1O15050 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.2■□□□□ 0.34
TRANK1O15050 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRANK1O15050 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms