Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ATP2A1O14983 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
ATP2A1O14983 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ATP2A1O14983 PP12613-201ENST00000424958 2230 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 AC236430.1-201ENST00000402231 743 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP2A1O14983 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 AC241585.1-201ENST00000433527 519 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP2A1O14983 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP2A1O14983 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.03■□□□□ 0.64
ATP2A1O14983 AC190387.1-201ENST00000551683 408 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 AC073592.8-201ENST00000624126 511 ntBASIC19.03■□□□□ 0.64
ATP2A1O14983 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP2A1O14983 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATP2A1O14983 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2A1O14983 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ATP2A1O14983 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.02■□□□□ 0.64
ATP2A1O14983 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.02■□□□□ 0.64
ATP2A1O14983 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2A1O14983 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2A1O14983 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATP2A1O14983 TERF1P3-201ENST00000505638 1227 ntBASIC19.02■□□□□ 0.64
ATP2A1O14983 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.02■□□□□ 0.64
ATP2A1O14983 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2A1O14983 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2A1O14983 SPTSSB-204ENST00000617024 1292 ntBASIC19.02■□□□□ 0.64
ATP2A1O14983 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2A1O14983 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2A1O14983 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2A1O14983 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
ATP2A1O14983 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2A1O14983 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ATP2A1O14983 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2A1O14983 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ATP2A1O14983 AC092068.3-201ENST00000587894 2016 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP2A1O14983 TSSK5P-201ENST00000423978 907 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2A1O14983 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2A1O14983 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 AC098859.1-201ENST00000502915 1238 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2A1O14983 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 AL590560.3-201ENST00000623350 461 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 PCDHB17P-201ENST00000539533 2393 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ATP2A1O14983 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ATP2A1O14983 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 AL035456.1-201ENST00000456064 1369 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 OR6D1P-203ENST00000641209 4860 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 LTB4R2-202ENST00000528054 3092 ntBASIC19.01■□□□□ 0.63
ATP2A1O14983 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ATP2A1O14983 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2A1O14983 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19■□□□□ 0.63
ATP2A1O14983 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19■□□□□ 0.63
ATP2A1O14983 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19■□□□□ 0.63
ATP2A1O14983 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATP2A1O14983 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19■□□□□ 0.63
ATP2A1O14983 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19■□□□□ 0.63
ATP2A1O14983 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2A1O14983 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms