Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1O14646 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC26.41■■□□□ 1.82
CHD1O14646 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
CHD1O14646 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC26.41■■□□□ 1.82
CHD1O14646 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC26.41■■□□□ 1.82
CHD1O14646 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC26.41■■□□□ 1.82
CHD1O14646 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC26.41■■□□□ 1.82
CHD1O14646 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1O14646 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 NME9-203ENST00000383180 2133 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CHD1O14646 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 RPS3-201ENST00000278572 907 ntTSL 3 BASIC26.4■■□□□ 1.82
CHD1O14646 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 AC004898.1-201ENST00000451057 766 ntBASIC26.4■■□□□ 1.82
CHD1O14646 PFN2-215ENST00000497148 743 ntTSL 4 BASIC26.4■■□□□ 1.82
CHD1O14646 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 SPIB-207ENST00000597855 564 ntTSL 4 BASIC26.4■■□□□ 1.82
CHD1O14646 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC26.4■■□□□ 1.82
CHD1O14646 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD1O14646 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD1O14646 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CHD1O14646 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CHD1O14646 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CHD1O14646 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD1O14646 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CHD1O14646 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CHD1O14646 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD1O14646 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD1O14646 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CHD1O14646 KRT8P39-201ENST00000396270 1433 ntBASIC26.39■■□□□ 1.81
CHD1O14646 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
CHD1O14646 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD1O14646 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD1O14646 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD1O14646 RPL13P2-201ENST00000440687 659 ntBASIC26.39■■□□□ 1.81
CHD1O14646 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC26.39■■□□□ 1.81
CHD1O14646 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CHD1O14646 RERG-205ENST00000537647 935 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD1O14646 AC020914.3-201ENST00000594712 304 ntBASIC26.39■■□□□ 1.81
CHD1O14646 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC26.39■■□□□ 1.81
CHD1O14646 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CHD1O14646 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 CSH2-202ENST00000345366 598 ntTSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC26.38■■□□□ 1.81
CHD1O14646 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 AC134915.1-201ENST00000426461 574 ntBASIC26.38■■□□□ 1.81
CHD1O14646 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 BX284668.4-201ENST00000453917 508 ntBASIC26.38■■□□□ 1.81
CHD1O14646 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC26.38■■□□□ 1.81
CHD1O14646 LARP4-220ENST00000615080 856 ntTSL 5 BASIC26.38■■□□□ 1.81
CHD1O14646 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD1O14646 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD1O14646 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC26.38■■□□□ 1.81
CHD1O14646 AC134312.5-201ENST00000568031 1313 ntBASIC26.37■■□□□ 1.81
CHD1O14646 AL355334.1-201ENST00000417713 215 ntBASIC26.37■■□□□ 1.81
CHD1O14646 DEF8-202ENST00000418391 852 ntTSL 2 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms