Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC004877.2-201ENST00000623941 599 ntBASIC17.81■□□□□ 0.44
O00370 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.81■□□□□ 0.44
O00370 AL645728.2-201ENST00000641974 660 ntBASIC17.81■□□□□ 0.44
O00370 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
O00370 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.81■□□□□ 0.44
O00370 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 AC025580.3-201ENST00000617932 1424 ntBASIC17.81■□□□□ 0.44
O00370 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.8■□□□□ 0.44
O00370 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
O00370 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.8■□□□□ 0.44
O00370 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
O00370 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
O00370 BCAR1-209ENST00000546196 1340 ntBASIC17.8■□□□□ 0.44
O00370 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
O00370 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
O00370 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 MIR940-201ENST00000401276 94 ntBASIC17.8■□□□□ 0.44
O00370 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
O00370 POLD2P1-201ENST00000511220 997 ntBASIC17.8■□□□□ 0.44
O00370 PGAM5P1-201ENST00000518923 814 ntBASIC17.8■□□□□ 0.44
O00370 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
O00370 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
O00370 KRT19P2-202ENST00000557173 1012 ntBASIC17.8■□□□□ 0.44
O00370 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.8■□□□□ 0.44
O00370 AC023141.13-201ENST00000604991 943 ntBASIC17.8■□□□□ 0.44
O00370 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
O00370 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.8■□□□□ 0.44
O00370 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
O00370 HLA-A-202ENST00000376806 1854 ntBASIC17.8■□□□□ 0.44
O00370 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.79■□□□□ 0.44
O00370 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
O00370 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.79■□□□□ 0.44
O00370 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.79■□□□□ 0.44
O00370 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.79■□□□□ 0.44
O00370 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.79■□□□□ 0.44
O00370 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.79■□□□□ 0.44
O00370 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 AL031432.2-201ENST00000566714 459 ntBASIC17.79■□□□□ 0.44
O00370 AL928711.1-201ENST00000570165 459 ntBASIC17.79■□□□□ 0.44
O00370 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.79■□□□□ 0.44
O00370 AL513190.1-201ENST00000621254 727 ntBASIC17.79■□□□□ 0.44
O00370 AP001350.2-201ENST00000625104 1094 ntBASIC17.79■□□□□ 0.44
O00370 AC007064.4-201ENST00000637740 555 ntBASIC17.79■□□□□ 0.44
O00370 AC092865.6-201ENST00000642101 219 ntBASIC17.79■□□□□ 0.44
O00370 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
O00370 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.79■□□□□ 0.44
O00370 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
O00370 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
O00370 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
O00370 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
O00370 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.79■□□□□ 0.44
O00370 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
O00370 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
O00370 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
O00370 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.78■□□□□ 0.44
O00370 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
O00370 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
O00370 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms