Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PKD1P1-201ENST00000458669 6805 ntBASIC17.75■□□□□ 0.43
RCCD1A6NED2 AC013268.4-201ENST00000637413 2228 ntBASIC17.75■□□□□ 0.43
RCCD1A6NED2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.75■□□□□ 0.43
RCCD1A6NED2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 LINC02447-202ENST00000501888 2146 ntBASIC17.75■□□□□ 0.43
RCCD1A6NED2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.74■□□□□ 0.43
RCCD1A6NED2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PTCHD3P3-201ENST00000403073 906 ntBASIC17.74■□□□□ 0.43
RCCD1A6NED2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 AL732292.2-201ENST00000609649 430 ntBASIC17.74■□□□□ 0.43
RCCD1A6NED2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 AC010654.1-201ENST00000615722 808 ntBASIC17.74■□□□□ 0.43
RCCD1A6NED2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCCD1A6NED2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RCCD1A6NED2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.73■□□□□ 0.43
RCCD1A6NED2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 KRT16P4-201ENST00000453883 522 ntBASIC17.73■□□□□ 0.43
RCCD1A6NED2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RCCD1A6NED2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCCD1A6NED2 AC087388.1-201ENST00000571370 1112 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms