Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 AL353705.2-201ENST00000428243 662 ntBASIC24.41■■□□□ 1.5
HFM1A2PYH4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 AC069120.2-201ENST00000524091 540 ntBASIC24.41■■□□□ 1.5
HFM1A2PYH4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HFM1A2PYH4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HFM1A2PYH4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HFM1A2PYH4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HFM1A2PYH4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC24.4■■□□□ 1.5
HFM1A2PYH4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HFM1A2PYH4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 AC055876.3-201ENST00000431496 288 ntBASIC24.39■■□□□ 1.5
HFM1A2PYH4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HFM1A2PYH4 AC138649.4-201ENST00000612222 287 ntBASIC24.39■■□□□ 1.5
HFM1A2PYH4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC24.39■■□□□ 1.5
HFM1A2PYH4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
HFM1A2PYH4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HFM1A2PYH4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HFM1A2PYH4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HFM1A2PYH4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
HFM1A2PYH4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
HFM1A2PYH4 U82695.1-201ENST00000635752 1889 ntBASIC24.39■■□□□ 1.49
HFM1A2PYH4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
HFM1A2PYH4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.49
HFM1A2PYH4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 MIR943-201ENST00000401286 94 ntBASIC24.38■■□□□ 1.49
HFM1A2PYH4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 TSSK5P-201ENST00000423978 907 ntBASIC24.38■■□□□ 1.49
HFM1A2PYH4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 AL592424.1-201ENST00000563624 1536 ntBASIC24.38■■□□□ 1.49
HFM1A2PYH4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 AC005622.1-201ENST00000636801 1703 ntBASIC24.38■■□□□ 1.49
HFM1A2PYH4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
HFM1A2PYH4 AL035456.1-201ENST00000456064 1369 ntBASIC24.38■■□□□ 1.49
HFM1A2PYH4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HFM1A2PYH4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HFM1A2PYH4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HFM1A2PYH4 AC005052.1-201ENST00000625181 2492 ntBASIC24.37■■□□□ 1.49
HFM1A2PYH4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 HLA-V-204ENST00000476601 1289 ntBASIC24.37■■□□□ 1.49
HFM1A2PYH4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 MIR4321-201ENST00000592276 80 ntBASIC24.37■■□□□ 1.49
HFM1A2PYH4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HFM1A2PYH4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HFM1A2PYH4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
HFM1A2PYH4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms