Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
VSIG4Q9Y279 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VSIG4Q9Y279 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VSIG4Q9Y279 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VSIG4Q9Y279 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
VSIG4Q9Y279 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
VSIG4Q9Y279 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
VSIG4Q9Y279 DUX4L11-201ENST00000611504 1267 ntBASIC20.08■□□□□ 0.81
VSIG4Q9Y279 DUX4L12-201ENST00000614593 1267 ntBASIC20.08■□□□□ 0.81
VSIG4Q9Y279 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.08■□□□□ 0.81
VSIG4Q9Y279 DUX4L14-201ENST00000621227 1267 ntBASIC20.08■□□□□ 0.81
VSIG4Q9Y279 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VSIG4Q9Y279 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.08■□□□□ 0.8
VSIG4Q9Y279 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 AP003733.4-201ENST00000623785 1697 ntBASIC20.07■□□□□ 0.8
VSIG4Q9Y279 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VSIG4Q9Y279 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VSIG4Q9Y279 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.05■□□□□ 0.8
VSIG4Q9Y279 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VSIG4Q9Y279 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VSIG4Q9Y279 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.03■□□□□ 0.8
VSIG4Q9Y279 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.03■□□□□ 0.8
VSIG4Q9Y279 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VSIG4Q9Y279 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.02■□□□□ 0.8
VSIG4Q9Y279 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VSIG4Q9Y279 LINC00543-201ENST00000567234 1845 ntBASIC20.02■□□□□ 0.8
VSIG4Q9Y279 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.02■□□□□ 0.8
VSIG4Q9Y279 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VSIG4Q9Y279 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VSIG4Q9Y279 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VSIG4Q9Y279 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 HLA-V-202ENST00000446817 847 ntBASIC20.01■□□□□ 0.79
VSIG4Q9Y279 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VSIG4Q9Y279 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VSIG4Q9Y279 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VSIG4Q9Y279 AC079834.2-201ENST00000609776 1949 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L13-201ENST00000554103 1267 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L15-201ENST00000611059 1267 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L23-201ENST00000615195 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L24-201ENST00000617576 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L22-201ENST00000618238 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L20-201ENST00000619712 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L21-201ENST00000622058 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L10-201ENST00000622460 1267 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 DUX4L25-201ENST00000624915 1269 ntBASIC20■□□□□ 0.79
VSIG4Q9Y279 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VSIG4Q9Y279 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20■□□□□ 0.79
VSIG4Q9Y279 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20■□□□□ 0.79
VSIG4Q9Y279 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VSIG4Q9Y279 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms