Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 Z92544.1-202ENST00000571933 1220 ntBASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRIT1Q9P2V4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 AC131212.1-201ENST00000613771 668 ntBASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRIT1Q9P2V4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 KRT18P24-201ENST00000344739 1156 ntBASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 THA1P-201ENST00000590384 1145 ntBASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
LRIT1Q9P2V4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.2■■□□□ 1.3
LRIT1Q9P2V4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.2■■□□□ 1.3
LRIT1Q9P2V4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRIT1Q9P2V4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRIT1Q9P2V4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRIT1Q9P2V4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
LRIT1Q9P2V4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
LRIT1Q9P2V4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
LRIT1Q9P2V4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.18■■□□□ 1.3
LRIT1Q9P2V4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRIT1Q9P2V4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRIT1Q9P2V4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 AL356441.2-201ENST00000443009 864 ntBASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 KRT125P-201ENST00000546827 989 ntBASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LRIT1Q9P2V4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 BX664725.1-201ENST00000438252 379 ntBASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRIT1Q9P2V4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.15■■□□□ 1.3
LRIT1Q9P2V4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRIT1Q9P2V4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.14■■□□□ 1.3
LRIT1Q9P2V4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 AL592295.1-201ENST00000400984 884 ntBASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 AC120024.1-201ENST00000562672 995 ntBASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.14■■□□□ 1.29
LRIT1Q9P2V4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 MIR4787-201ENST00000607364 84 ntBASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.13■■□□□ 1.29
LRIT1Q9P2V4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRIT1Q9P2V4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRIT1Q9P2V4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.11■■□□□ 1.29
LRIT1Q9P2V4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRIT1Q9P2V4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.11■■□□□ 1.29
LRIT1Q9P2V4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRIT1Q9P2V4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.1■■□□□ 1.29
LRIT1Q9P2V4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRIT1Q9P2V4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.1■■□□□ 1.29
LRIT1Q9P2V4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRIT1Q9P2V4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRIT1Q9P2V4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms