Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD9Q9P000 AC110285.7-201ENST00000624417 1536 ntBASIC20.15■□□□□ 0.82
COMMD9Q9P000 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD9Q9P000 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD9Q9P000 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.15■□□□□ 0.82
COMMD9Q9P000 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD9Q9P000 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.14■□□□□ 0.81
COMMD9Q9P000 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD9Q9P000 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COMMD9Q9P000 WHAMMP3-201ENST00000611636 1609 ntBASIC20.13■□□□□ 0.81
COMMD9Q9P000 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD9Q9P000 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD9Q9P000 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD9Q9P000 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COMMD9Q9P000 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.13■□□□□ 0.81
COMMD9Q9P000 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COMMD9Q9P000 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
COMMD9Q9P000 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD9Q9P000 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD9Q9P000 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 AL162393.1-201ENST00000437852 946 ntBASIC20.12■□□□□ 0.81
COMMD9Q9P000 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COMMD9Q9P000 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.12■□□□□ 0.81
COMMD9Q9P000 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD9Q9P000 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD9Q9P000 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD9Q9P000 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD9Q9P000 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COMMD9Q9P000 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.11■□□□□ 0.81
COMMD9Q9P000 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COMMD9Q9P000 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
COMMD9Q9P000 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COMMD9Q9P000 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.1■□□□□ 0.81
COMMD9Q9P000 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.1■□□□□ 0.81
COMMD9Q9P000 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COMMD9Q9P000 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD9Q9P000 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.09■□□□□ 0.81
COMMD9Q9P000 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.09■□□□□ 0.81
COMMD9Q9P000 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD9Q9P000 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD9Q9P000 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD9Q9P000 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD9Q9P000 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COMMD9Q9P000 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD9Q9P000 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD9Q9P000 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD9Q9P000 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.08■□□□□ 0.81
COMMD9Q9P000 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COMMD9Q9P000 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
COMMD9Q9P000 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD9Q9P000 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COMMD9Q9P000 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD9Q9P000 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD9Q9P000 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COMMD9Q9P000 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.07■□□□□ 0.8
COMMD9Q9P000 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COMMD9Q9P000 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COMMD9Q9P000 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD9Q9P000 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.06■□□□□ 0.8
COMMD9Q9P000 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD9Q9P000 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COMMD9Q9P000 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.06■□□□□ 0.8
COMMD9Q9P000 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD9Q9P000 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD9Q9P000 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD9Q9P000 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD9Q9P000 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD9Q9P000 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.04■□□□□ 0.8
COMMD9Q9P000 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD9Q9P000 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD9Q9P000 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD9Q9P000 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COMMD9Q9P000 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COMMD9Q9P000 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.03■□□□□ 0.8
COMMD9Q9P000 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms