Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 AC060814.1-201ENST00000554326 538 ntBASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.71■□□□□ 0.75
LIN7CQ9NUP9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 GPX1-201ENST00000419349 1106 ntBASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN7CQ9NUP9 AL139125.2-201ENST00000623134 1869 ntBASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
LIN7CQ9NUP9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIN7CQ9NUP9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN7CQ9NUP9 AL359504.2-201ENST00000605506 1601 ntBASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN7CQ9NUP9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 HSD17B1P1-201ENST00000590052 955 ntBASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIN7CQ9NUP9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
LIN7CQ9NUP9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIN7CQ9NUP9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LIN7CQ9NUP9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.64■□□□□ 0.73
LIN7CQ9NUP9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LIN7CQ9NUP9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 AC092296.2-201ENST00000589470 999 ntBASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LIN7CQ9NUP9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN7CQ9NUP9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN7CQ9NUP9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LIN7CQ9NUP9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LIN7CQ9NUP9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 ECEL1P2-201ENST00000461596 1295 ntBASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LIN7CQ9NUP9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 RNF126P1-201ENST00000567452 1320 ntBASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 AL157400.5-201ENST00000507624 621 ntBASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LIN7CQ9NUP9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms