Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC42SE1Q9NRR8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC42SE1Q9NRR8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC42SE1Q9NRR8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC42SE1Q9NRR8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC42SE1Q9NRR8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CDC42SE1Q9NRR8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDC42SE1Q9NRR8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 LINC01003-201ENST00000564834 1764 ntBASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE1Q9NRR8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 AL391422.3-201ENST00000603791 2761 ntBASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 AC142381.3-201ENST00000568208 1670 ntBASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 AC137767.1-201ENST00000602918 1920 ntBASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE1Q9NRR8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 AC138932.1-201ENST00000534164 6830 ntBASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE1Q9NRR8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE1Q9NRR8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC42SE1Q9NRR8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CDC42SE1Q9NRR8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE1Q9NRR8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms