Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP1R3EQ9H7J1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.11■□□□□ 0.97
PPP1R3EQ9H7J1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP1R3EQ9H7J1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PPP1R3EQ9H7J1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP1R3EQ9H7J1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 AL359258.2-201ENST00000564063 1566 ntBASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP1R3EQ9H7J1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PPP1R3EQ9H7J1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PPP1R3EQ9H7J1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PPP1R3EQ9H7J1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PPP1R3EQ9H7J1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.08■□□□□ 0.97
PPP1R3EQ9H7J1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PPP1R3EQ9H7J1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.08■□□□□ 0.96
PPP1R3EQ9H7J1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3EQ9H7J1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3EQ9H7J1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3EQ9H7J1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.07■□□□□ 0.96
PPP1R3EQ9H7J1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3EQ9H7J1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PPP1R3EQ9H7J1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PPP1R3EQ9H7J1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3EQ9H7J1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3EQ9H7J1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.03■□□□□ 0.96
PPP1R3EQ9H7J1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3EQ9H7J1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.03■□□□□ 0.96
PPP1R3EQ9H7J1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PPP1R3EQ9H7J1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 MIR639-201ENST00000384974 98 ntBASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 AL359504.2-201ENST00000605506 1601 ntBASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3EQ9H7J1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PPP1R3EQ9H7J1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3EQ9H7J1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3EQ9H7J1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3EQ9H7J1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3EQ9H7J1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3EQ9H7J1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3EQ9H7J1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 LINC01124-201ENST00000409786 2117 ntBASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 AC097639.1-201ENST00000565519 1891 ntBASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms