Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
FAM49AQ9H0Q0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
FAM49AQ9H0Q0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
FAM49AQ9H0Q0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.44■■□□□ 1.82
FAM49AQ9H0Q0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 AL356441.2-201ENST00000443009 864 ntBASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FAM49AQ9H0Q0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 Z92544.1-202ENST00000571933 1220 ntBASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.42■■□□□ 1.82
FAM49AQ9H0Q0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.41■■□□□ 1.82
FAM49AQ9H0Q0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FAM49AQ9H0Q0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
FAM49AQ9H0Q0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FAM49AQ9H0Q0 KRT18P24-201ENST00000344739 1156 ntBASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 AC120024.1-201ENST00000562672 995 ntBASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.4■■□□□ 1.82
FAM49AQ9H0Q0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
FAM49AQ9H0Q0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.39■■□□□ 1.82
FAM49AQ9H0Q0 KRT125P-201ENST00000546827 989 ntBASIC26.39■■□□□ 1.82
FAM49AQ9H0Q0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
FAM49AQ9H0Q0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
FAM49AQ9H0Q0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 AL592295.1-201ENST00000400984 884 ntBASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 BX664725.1-201ENST00000438252 379 ntBASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.38■■□□□ 1.81
FAM49AQ9H0Q0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
FAM49AQ9H0Q0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.37■■□□□ 1.81
FAM49AQ9H0Q0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.37■■□□□ 1.81
FAM49AQ9H0Q0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
FAM49AQ9H0Q0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
FAM49AQ9H0Q0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 MIR4787-201ENST00000607364 84 ntBASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FAM49AQ9H0Q0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
FAM49AQ9H0Q0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FAM49AQ9H0Q0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
FAM49AQ9H0Q0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.33■■□□□ 1.81
FAM49AQ9H0Q0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.33■■□□□ 1.81
FAM49AQ9H0Q0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.33■■□□□ 1.81
FAM49AQ9H0Q0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
FAM49AQ9H0Q0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms