Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF2Q99496 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF2Q99496 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF2Q99496 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF2Q99496 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF2Q99496 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF2Q99496 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF2Q99496 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF2Q99496 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 AC138932.3-201ENST00000567634 1902 ntBASIC18.8■□□□□ 0.6
RNF2Q99496 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF2Q99496 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF2Q99496 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF2Q99496 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RNF2Q99496 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF2Q99496 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF2Q99496 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF2Q99496 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF2Q99496 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF2Q99496 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF2Q99496 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF2Q99496 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RNF2Q99496 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF2Q99496 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF2Q99496 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF2Q99496 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
RNF2Q99496 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF2Q99496 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF2Q99496 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF2Q99496 AL359258.2-201ENST00000564063 1566 ntBASIC18.76■□□□□ 0.59
RNF2Q99496 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF2Q99496 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF2Q99496 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF2Q99496 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF2Q99496 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RNF2Q99496 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF2Q99496 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF2Q99496 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF2Q99496 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF2Q99496 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF2Q99496 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF2Q99496 MIR4449-201ENST00000578365 66 ntBASIC18.74■□□□□ 0.59
RNF2Q99496 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF2Q99496 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF2Q99496 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF2Q99496 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF2Q99496 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF2Q99496 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF2Q99496 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF2Q99496 AC126177.7-201ENST00000547904 679 ntBASIC18.73■□□□□ 0.59
RNF2Q99496 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF2Q99496 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF2Q99496 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF2Q99496 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF2Q99496 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF2Q99496 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms