Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PRICKLE1Q96MT3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PRICKLE1Q96MT3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PRICKLE1Q96MT3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PRICKLE1Q96MT3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.71■■□□□ 1.55
PRICKLE1Q96MT3 ERN1-208ENST00000606895 2068 ntBASIC24.71■■□□□ 1.55
PRICKLE1Q96MT3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
PRICKLE1Q96MT3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PRICKLE1Q96MT3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PRICKLE1Q96MT3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PRICKLE1Q96MT3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 KRT8P33-201ENST00000508125 1423 ntBASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRICKLE1Q96MT3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 LONRF2P2-201ENST00000439212 571 ntBASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 AC103834.1-201ENST00000520383 144 ntBASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PRICKLE1Q96MT3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 KRT18P10-201ENST00000388836 1287 ntBASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PRICKLE1Q96MT3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.66■■□□□ 1.54
PRICKLE1Q96MT3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.66■■□□□ 1.54
PRICKLE1Q96MT3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.66■■□□□ 1.54
PRICKLE1Q96MT3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PRICKLE1Q96MT3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 AC096887.2-201ENST00000623443 1957 ntBASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.65■■□□□ 1.54
PRICKLE1Q96MT3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 AC019171.1-201ENST00000601251 1056 ntBASIC24.64■■□□□ 1.54
PRICKLE1Q96MT3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.64■■□□□ 1.53
PRICKLE1Q96MT3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PRICKLE1Q96MT3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PRICKLE1Q96MT3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRICKLE1Q96MT3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PRICKLE1Q96MT3 AC092803.2-201ENST00000564287 1899 ntBASIC24.63■■□□□ 1.53
PRICKLE1Q96MT3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PRICKLE1Q96MT3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRICKLE1Q96MT3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.61■■□□□ 1.53
PRICKLE1Q96MT3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PRICKLE1Q96MT3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PRICKLE1Q96MT3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PRICKLE1Q96MT3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 AC010501.1-201ENST00000606270 1962 ntBASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 MIR4508-201ENST00000584178 70 ntBASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
PRICKLE1Q96MT3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PRICKLE1Q96MT3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms