Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 LINC01124-201ENST00000409786 2117 ntBASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 MIR3648-2-201ENST00000581792 180 ntBASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 MIR3648-1-201ENST00000615959 180 ntBASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC47A1Q96FL8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC47A1Q96FL8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.39■■□□□ 1.18
SLC47A1Q96FL8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC47A1Q96FL8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.39■■□□□ 1.18
SLC47A1Q96FL8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC47A1Q96FL8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC47A1Q96FL8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC47A1Q96FL8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC47A1Q96FL8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 AP003733.4-201ENST00000623785 1697 ntBASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.37■■□□□ 1.17
SLC47A1Q96FL8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SLC47A1Q96FL8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SLC47A1Q96FL8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC47A1Q96FL8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.34■■□□□ 1.17
SLC47A1Q96FL8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC47A1Q96FL8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC47A1Q96FL8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC47A1Q96FL8 AL359258.2-201ENST00000564063 1566 ntBASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 AC016575.1-201ENST00000607026 382 ntBASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
SLC47A1Q96FL8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SLC47A1Q96FL8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SLC47A1Q96FL8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC47A1Q96FL8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC47A1Q96FL8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC47A1Q96FL8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SLC47A1Q96FL8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 AL359504.2-201ENST00000605506 1601 ntBASIC22.31■■□□□ 1.16
SLC47A1Q96FL8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 AC133561.1-201ENST00000568600 2415 ntBASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
SLC47A1Q96FL8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC47A1Q96FL8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC47A1Q96FL8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.29■■□□□ 1.16
SLC47A1Q96FL8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms