Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.62■■■□□ 2.33
SNED1Q8TER0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.62■■■□□ 2.33
SNED1Q8TER0 AL117332.1-201ENST00000622628 974 ntBASIC29.62■■■□□ 2.33
SNED1Q8TER0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNED1Q8TER0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.61■■■□□ 2.33
SNED1Q8TER0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.61■■■□□ 2.33
SNED1Q8TER0 AC110285.6-201ENST00000617652 491 ntBASIC29.61■■■□□ 2.33
SNED1Q8TER0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
SNED1Q8TER0 DRD5P2-201ENST00000421395 2012 ntBASIC29.6■■■□□ 2.33
SNED1Q8TER0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNED1Q8TER0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNED1Q8TER0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNED1Q8TER0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SNED1Q8TER0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.59■■■□□ 2.33
SNED1Q8TER0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SNED1Q8TER0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.59■■■□□ 2.33
SNED1Q8TER0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.59■■■□□ 2.33
SNED1Q8TER0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNED1Q8TER0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.58■■■□□ 2.33
SNED1Q8TER0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.58■■■□□ 2.33
SNED1Q8TER0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
SNED1Q8TER0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNED1Q8TER0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.57■■■□□ 2.32
SNED1Q8TER0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNED1Q8TER0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNED1Q8TER0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNED1Q8TER0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SNED1Q8TER0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SNED1Q8TER0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNED1Q8TER0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
SNED1Q8TER0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
SNED1Q8TER0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SNED1Q8TER0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SNED1Q8TER0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SNED1Q8TER0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNED1Q8TER0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNED1Q8TER0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.54■■■□□ 2.32
SNED1Q8TER0 MIR3621-201ENST00000580529 85 ntBASIC29.54■■■□□ 2.32
SNED1Q8TER0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
SNED1Q8TER0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
SNED1Q8TER0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNED1Q8TER0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNED1Q8TER0 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.54■■■□□ 2.32
SNED1Q8TER0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.54■■■□□ 2.32
SNED1Q8TER0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SNED1Q8TER0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SNED1Q8TER0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SNED1Q8TER0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.53■■■□□ 2.32
SNED1Q8TER0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.52■■■□□ 2.32
SNED1Q8TER0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
SNED1Q8TER0 AL136116.3-201ENST00000402907 1138 ntBASIC29.52■■■□□ 2.32
SNED1Q8TER0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.52■■■□□ 2.32
SNED1Q8TER0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
SNED1Q8TER0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SNED1Q8TER0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SNED1Q8TER0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.51■■■□□ 2.31
SNED1Q8TER0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SNED1Q8TER0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNED1Q8TER0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNED1Q8TER0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 AL512631.2-201ENST00000604634 923 ntBASIC29.49■■■□□ 2.31
SNED1Q8TER0 MIR4466-201ENST00000606121 54 ntBASIC29.49■■■□□ 2.31
SNED1Q8TER0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 BX255925.1-201ENST00000566954 1854 ntBASIC29.49■■■□□ 2.31
SNED1Q8TER0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SNED1Q8TER0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
SNED1Q8TER0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.48■■■□□ 2.31
SNED1Q8TER0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SNED1Q8TER0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.48■■■□□ 2.31
SNED1Q8TER0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.48■■■□□ 2.31
SNED1Q8TER0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNED1Q8TER0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
SNED1Q8TER0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
SNED1Q8TER0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNED1Q8TER0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
SNED1Q8TER0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNED1Q8TER0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNED1Q8TER0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
SNED1Q8TER0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNED1Q8TER0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SNED1Q8TER0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SNED1Q8TER0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNED1Q8TER0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.46■■■□□ 2.31
SNED1Q8TER0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
SNED1Q8TER0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.45■■■□□ 2.31
SNED1Q8TER0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNED1Q8TER0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.45■■■□□ 2.31
SNED1Q8TER0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SNED1Q8TER0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.45■■■□□ 2.3
SNED1Q8TER0 MIR6724-1-201ENST00000616420 92 ntBASIC29.45■■■□□ 2.3
SNED1Q8TER0 MIR6724-2-201ENST00000616483 92 ntBASIC29.45■■■□□ 2.3
SNED1Q8TER0 MIR6724-4-201ENST00000617390 92 ntBASIC29.45■■■□□ 2.3
SNED1Q8TER0 MIR6724-3-201ENST00000622482 92 ntBASIC29.45■■■□□ 2.3
SNED1Q8TER0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNED1Q8TER0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.44■■■□□ 2.3
SNED1Q8TER0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNED1Q8TER0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms