Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
TRPM4Q8TD43 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.88■■■□□ 2.21
TRPM4Q8TD43 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.88■■■□□ 2.21
TRPM4Q8TD43 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.88■■■□□ 2.21
TRPM4Q8TD43 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
TRPM4Q8TD43 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
TRPM4Q8TD43 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
TRPM4Q8TD43 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
TRPM4Q8TD43 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TRPM4Q8TD43 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TRPM4Q8TD43 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.86■■■□□ 2.21
TRPM4Q8TD43 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
TRPM4Q8TD43 MIR6724-1-201ENST00000616420 92 ntBASIC28.86■■■□□ 2.21
TRPM4Q8TD43 MIR6724-2-201ENST00000616483 92 ntBASIC28.86■■■□□ 2.21
TRPM4Q8TD43 MIR6724-4-201ENST00000617390 92 ntBASIC28.86■■■□□ 2.21
TRPM4Q8TD43 MIR6724-3-201ENST00000622482 92 ntBASIC28.86■■■□□ 2.21
TRPM4Q8TD43 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
TRPM4Q8TD43 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
TRPM4Q8TD43 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
TRPM4Q8TD43 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
TRPM4Q8TD43 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
TRPM4Q8TD43 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
TRPM4Q8TD43 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.84■■■□□ 2.21
TRPM4Q8TD43 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
TRPM4Q8TD43 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.83■■■□□ 2.21
TRPM4Q8TD43 MTDHP2-201ENST00000601468 714 ntBASIC28.83■■■□□ 2.21
TRPM4Q8TD43 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.83■■■□□ 2.21
TRPM4Q8TD43 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.83■■■□□ 2.21
TRPM4Q8TD43 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.2
TRPM4Q8TD43 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TRPM4Q8TD43 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.82■■■□□ 2.2
TRPM4Q8TD43 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TRPM4Q8TD43 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.81■■■□□ 2.2
TRPM4Q8TD43 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
TRPM4Q8TD43 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.8■■■□□ 2.2
TRPM4Q8TD43 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.8■■■□□ 2.2
TRPM4Q8TD43 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TRPM4Q8TD43 AL356740.2-201ENST00000601559 647 ntBASIC28.8■■■□□ 2.2
TRPM4Q8TD43 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
TRPM4Q8TD43 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TRPM4Q8TD43 AL512631.2-201ENST00000604634 923 ntBASIC28.79■■■□□ 2.2
TRPM4Q8TD43 ABCB10P1-201ENST00000614297 2181 ntBASIC28.79■■■□□ 2.2
TRPM4Q8TD43 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TRPM4Q8TD43 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TRPM4Q8TD43 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.78■■■□□ 2.2
TRPM4Q8TD43 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.78■■■□□ 2.2
TRPM4Q8TD43 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
TRPM4Q8TD43 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
TRPM4Q8TD43 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TRPM4Q8TD43 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.77■■■□□ 2.2
TRPM4Q8TD43 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.77■■■□□ 2.2
TRPM4Q8TD43 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.76■■■□□ 2.2
TRPM4Q8TD43 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.76■■■□□ 2.19
TRPM4Q8TD43 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRPM4Q8TD43 ZNRF2P3-201ENST00000424200 374 ntBASIC28.76■■■□□ 2.19
TRPM4Q8TD43 AC133561.4-201ENST00000566112 224 ntBASIC28.76■■■□□ 2.19
TRPM4Q8TD43 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
TRPM4Q8TD43 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TRPM4Q8TD43 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.75■■■□□ 2.19
TRPM4Q8TD43 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.74■■■□□ 2.19
TRPM4Q8TD43 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.74■■■□□ 2.19
TRPM4Q8TD43 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.74■■■□□ 2.19
TRPM4Q8TD43 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TRPM4Q8TD43 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
TRPM4Q8TD43 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TRPM4Q8TD43 BX255925.1-201ENST00000566954 1854 ntBASIC28.73■■■□□ 2.19
TRPM4Q8TD43 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.73■■■□□ 2.19
TRPM4Q8TD43 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.72■■■□□ 2.19
TRPM4Q8TD43 RARRES2P6-201ENST00000567333 442 ntBASIC28.72■■■□□ 2.19
TRPM4Q8TD43 AC092666.2-201ENST00000613287 246 ntBASIC28.72■■■□□ 2.19
TRPM4Q8TD43 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.72■■■□□ 2.19
TRPM4Q8TD43 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.71■■■□□ 2.19
TRPM4Q8TD43 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.71■■■□□ 2.19
TRPM4Q8TD43 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
TRPM4Q8TD43 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
TRPM4Q8TD43 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TRPM4Q8TD43 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
TRPM4Q8TD43 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TRPM4Q8TD43 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.7■■■□□ 2.18
TRPM4Q8TD43 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.7■■■□□ 2.18
TRPM4Q8TD43 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TRPM4Q8TD43 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TRPM4Q8TD43 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.69■■■□□ 2.18
TRPM4Q8TD43 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.69■■■□□ 2.18
TRPM4Q8TD43 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.69■■■□□ 2.18
TRPM4Q8TD43 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRPM4Q8TD43 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TRPM4Q8TD43 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.68■■■□□ 2.18
TRPM4Q8TD43 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms