Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC139795.1-202ENST00000500444 432 ntBASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAM1L1Q8N609 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 BHLHE23-202ENST00000612929 1109 ntBASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRAM1L1Q8N609 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
TRAM1L1Q8N609 AC074183.2-201ENST00000623112 922 ntBASIC23.72■■□□□ 1.39
TRAM1L1Q8N609 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAM1L1Q8N609 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAM1L1Q8N609 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.71■■□□□ 1.39
TRAM1L1Q8N609 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRAM1L1Q8N609 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRAM1L1Q8N609 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRAM1L1Q8N609 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAM1L1Q8N609 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.7■■□□□ 1.38
TRAM1L1Q8N609 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
TRAM1L1Q8N609 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAM1L1Q8N609 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.69■■□□□ 1.38
TRAM1L1Q8N609 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAM1L1Q8N609 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 AC097639.1-201ENST00000565519 1891 ntBASIC23.68■■□□□ 1.38
TRAM1L1Q8N609 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAM1L1Q8N609 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 LONRF2P2-201ENST00000439212 571 ntBASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRAM1L1Q8N609 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 AC010980.1-201ENST00000587192 1142 ntBASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAM1L1Q8N609 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRAM1L1Q8N609 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.64■■□□□ 1.37
TRAM1L1Q8N609 AC019171.1-201ENST00000601251 1056 ntBASIC23.64■■□□□ 1.37
TRAM1L1Q8N609 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.64■■□□□ 1.37
TRAM1L1Q8N609 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRAM1L1Q8N609 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRAM1L1Q8N609 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRAM1L1Q8N609 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.63■■□□□ 1.37
TRAM1L1Q8N609 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.63■■□□□ 1.37
TRAM1L1Q8N609 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRAM1L1Q8N609 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.61■■□□□ 1.37
TRAM1L1Q8N609 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms