Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SMIM5Q71RC9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMIM5Q71RC9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.73■■■□□ 2.51
SMIM5Q71RC9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMIM5Q71RC9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 MIR4281-201ENST00000580852 62 ntBASIC30.71■■■□□ 2.51
SMIM5Q71RC9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.71■■■□□ 2.51
SMIM5Q71RC9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SMIM5Q71RC9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SMIM5Q71RC9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMIM5Q71RC9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.69■■■□□ 2.5
SMIM5Q71RC9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.69■■■□□ 2.5
SMIM5Q71RC9 MIR3621-201ENST00000580529 85 ntBASIC30.69■■■□□ 2.5
SMIM5Q71RC9 AC139426.1-201ENST00000568218 2529 ntBASIC30.68■■■□□ 2.5
SMIM5Q71RC9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.68■■■□□ 2.5
SMIM5Q71RC9 AC010997.5-201ENST00000609182 354 ntBASIC30.68■■■□□ 2.5
SMIM5Q71RC9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMIM5Q71RC9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMIM5Q71RC9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SMIM5Q71RC9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.65■■■□□ 2.5
SMIM5Q71RC9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
SMIM5Q71RC9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMIM5Q71RC9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SMIM5Q71RC9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.64■■■□□ 2.5
SMIM5Q71RC9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
SMIM5Q71RC9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
SMIM5Q71RC9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 BX255925.1-201ENST00000566954 1854 ntBASIC30.62■■■□□ 2.49
SMIM5Q71RC9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.62■■■□□ 2.49
SMIM5Q71RC9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SMIM5Q71RC9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMIM5Q71RC9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SMIM5Q71RC9 ZNRF2P3-201ENST00000424200 374 ntBASIC30.61■■■□□ 2.49
SMIM5Q71RC9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMIM5Q71RC9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMIM5Q71RC9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMIM5Q71RC9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMIM5Q71RC9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SMIM5Q71RC9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.6■■■□□ 2.49
SMIM5Q71RC9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.6■■■□□ 2.49
SMIM5Q71RC9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SMIM5Q71RC9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SMIM5Q71RC9 MIR6724-1-201ENST00000616420 92 ntBASIC30.59■■■□□ 2.49
SMIM5Q71RC9 MIR6724-2-201ENST00000616483 92 ntBASIC30.59■■■□□ 2.49
SMIM5Q71RC9 MIR6724-4-201ENST00000617390 92 ntBASIC30.59■■■□□ 2.49
SMIM5Q71RC9 MIR6724-3-201ENST00000622482 92 ntBASIC30.59■■■□□ 2.49
SMIM5Q71RC9 DRD5P2-201ENST00000421395 2012 ntBASIC30.59■■■□□ 2.49
SMIM5Q71RC9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.58■■■□□ 2.49
SMIM5Q71RC9 AL512631.2-201ENST00000604634 923 ntBASIC30.58■■■□□ 2.49
SMIM5Q71RC9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SMIM5Q71RC9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.57■■■□□ 2.48
SMIM5Q71RC9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.57■■■□□ 2.48
SMIM5Q71RC9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SMIM5Q71RC9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SMIM5Q71RC9 KRT18P10-201ENST00000388836 1287 ntBASIC30.56■■■□□ 2.48
SMIM5Q71RC9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMIM5Q71RC9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMIM5Q71RC9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SMIM5Q71RC9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.55■■■□□ 2.48
SMIM5Q71RC9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.55■■■□□ 2.48
SMIM5Q71RC9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.55■■■□□ 2.48
SMIM5Q71RC9 AC092666.2-201ENST00000613287 246 ntBASIC30.55■■■□□ 2.48
SMIM5Q71RC9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms