Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDNFQ49AH0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDNFQ49AH0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDNFQ49AH0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CDNFQ49AH0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDNFQ49AH0 MIR219A2-201ENST00000608502 1504 ntBASIC20.35■□□□□ 0.85
CDNFQ49AH0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.35■□□□□ 0.85
CDNFQ49AH0 AL359504.2-201ENST00000605506 1601 ntBASIC20.35■□□□□ 0.85
CDNFQ49AH0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDNFQ49AH0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.34■□□□□ 0.85
CDNFQ49AH0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDNFQ49AH0 AC008813.1-201ENST00000536597 885 ntBASIC20.34■□□□□ 0.85
CDNFQ49AH0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.34■□□□□ 0.85
CDNFQ49AH0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.34■□□□□ 0.85
CDNFQ49AH0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDNFQ49AH0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDNFQ49AH0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDNFQ49AH0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDNFQ49AH0 AL359258.2-201ENST00000564063 1566 ntBASIC20.33■□□□□ 0.84
CDNFQ49AH0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDNFQ49AH0 AC133561.1-201ENST00000568600 2415 ntBASIC20.33■□□□□ 0.84
CDNFQ49AH0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDNFQ49AH0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDNFQ49AH0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CDNFQ49AH0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.32■□□□□ 0.84
CDNFQ49AH0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.32■□□□□ 0.84
CDNFQ49AH0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDNFQ49AH0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDNFQ49AH0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDNFQ49AH0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.31■□□□□ 0.84
CDNFQ49AH0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDNFQ49AH0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDNFQ49AH0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
CDNFQ49AH0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDNFQ49AH0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CDNFQ49AH0 AC148477.6-201ENST00000623746 465 ntBASIC20.3■□□□□ 0.84
CDNFQ49AH0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDNFQ49AH0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDNFQ49AH0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.29■□□□□ 0.84
CDNFQ49AH0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDNFQ49AH0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 AC097639.1-201ENST00000565519 1891 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.28■□□□□ 0.84
CDNFQ49AH0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.28■□□□□ 0.84
CDNFQ49AH0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L13-201ENST00000554103 1267 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L15-201ENST00000611059 1267 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L23-201ENST00000615195 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L24-201ENST00000617576 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L22-201ENST00000618238 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L20-201ENST00000619712 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L21-201ENST00000622058 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L10-201ENST00000622460 1267 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 DUX4L25-201ENST00000624915 1269 ntBASIC20.28■□□□□ 0.84
CDNFQ49AH0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDNFQ49AH0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDNFQ49AH0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDNFQ49AH0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDNFQ49AH0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDNFQ49AH0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDNFQ49AH0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.27■□□□□ 0.84
CDNFQ49AH0 LINC01971-201ENST00000617888 1048 ntBASIC20.27■□□□□ 0.84
CDNFQ49AH0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDNFQ49AH0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDNFQ49AH0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.26■□□□□ 0.83
CDNFQ49AH0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDNFQ49AH0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDNFQ49AH0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDNFQ49AH0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDNFQ49AH0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDNFQ49AH0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.26■□□□□ 0.83
CDNFQ49AH0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.25■□□□□ 0.83
CDNFQ49AH0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDNFQ49AH0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms