Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PYC1YGL062W 3537 nt6.05□□□□□ -1.44
VPS13Q07878 PRB1YEL060C 1908 nt6.05□□□□□ -1.44
VPS13Q07878 TYS1YGR185C 1185 nt6.04□□□□□ -1.44
VPS13Q07878 YDR415CYDR415C 1125 nt6.04□□□□□ -1.44
VPS13Q07878 TDH3YGR192C 999 nt6.04□□□□□ -1.44
VPS13Q07878 YLR112WYLR112W 420 nt6.04□□□□□ -1.44
VPS13Q07878 YOL019W-AYOL019W-A 153 nt6.04□□□□□ -1.44
VPS13Q07878 THI2YBR240C 1353 nt6.03□□□□□ -1.44
VPS13Q07878 YIL171W-AYIL171W-A 453 nt6.03□□□□□ -1.44
VPS13Q07878 YJL220WYJL220W 453 nt6.03□□□□□ -1.44
VPS13Q07878 ELC1YPL046C 300 nt6.03□□□□□ -1.44
VPS13Q07878 HSV2YGR223C 1347 nt6.03□□□□□ -1.44
VPS13Q07878 CSG2YBR036C 1233 nt6.03□□□□□ -1.44
VPS13Q07878 YHR070C-AYHR070C-A 411 nt6.02□□□□□ -1.45
VPS13Q07878 YHR127WYHR127W 732 nt6.02□□□□□ -1.45
VPS13Q07878 PGK1YCR012W 1251 nt6.02□□□□□ -1.45
VPS13Q07878 YER010CYER010C 705 nt6.02□□□□□ -1.45
VPS13Q07878 GIT1YCR098C 1557 nt6.02□□□□□ -1.45
VPS13Q07878 NPA3YJR072C 1158 nt6.01□□□□□ -1.45
VPS13Q07878 ECM38YLR299W 1983 nt6.01□□□□□ -1.45
VPS13Q07878 DUS4YLR405W 1104 nt6.01□□□□□ -1.45
VPS13Q07878 CYB2YML054C 1776 nt6.01□□□□□ -1.45
VPS13Q07878 SHE10YGL228W 1734 nt6□□□□□ -1.45
VPS13Q07878 GSH1YJL101C 2037 nt6□□□□□ -1.45
VPS13Q07878 CHA1YCL064C 1083 nt6□□□□□ -1.45
VPS13Q07878 YIR042CYIR042C 711 nt6□□□□□ -1.45
VPS13Q07878 YMC1YPR058W 924 nt6□□□□□ -1.45
VPS13Q07878 TOD6YBL054W 1578 nt6□□□□□ -1.45
VPS13Q07878 CAN1YEL063C 1773 nt6□□□□□ -1.45
VPS13Q07878 DIT2YDR402C 1470 nt6□□□□□ -1.45
VPS13Q07878 DJP1YIR004W 1299 nt5.99□□□□□ -1.45
VPS13Q07878 YLR123CYLR123C 330 nt5.99□□□□□ -1.45
VPS13Q07878 YBR144CYBR144C 315 nt5.99□□□□□ -1.45
VPS13Q07878 THI21YPL258C 1656 nt5.99□□□□□ -1.45
VPS13Q07878 RPL5YPL131W 894 nt5.99□□□□□ -1.45
VPS13Q07878 HXT5YHR096C 1779 nt5.98□□□□□ -1.45
VPS13Q07878 BCY1YIL033C 1251 nt5.98□□□□□ -1.45
VPS13Q07878 UTR2YEL040W 1404 nt5.98□□□□□ -1.45
VPS13Q07878 MET8YBR213W 825 nt5.97□□□□□ -1.45
VPS13Q07878 BUL1YMR275C 2931 nt5.97□□□□□ -1.45
VPS13Q07878 SUP19tS(UGA)E 82 nt5.97□□□□□ -1.45
VPS13Q07878 SUP17tS(UGA)I 82 nt5.97□□□□□ -1.45
VPS13Q07878 SUP16tS(UGA)P 82 nt5.97□□□□□ -1.45
VPS13Q07878 ETR1YBR026C 1143 nt5.97□□□□□ -1.45
VPS13Q07878 CCC2YDR270W 3015 nt5.97□□□□□ -1.45
VPS13Q07878 MVD1YNR043W 1191 nt5.96□□□□□ -1.45
VPS13Q07878 VPS1YKR001C 2115 nt5.96□□□□□ -1.45
VPS13Q07878 IES2YNL215W 963 nt5.96□□□□□ -1.46
VPS13Q07878 CAM1YPL048W 1248 nt5.96□□□□□ -1.46
VPS13Q07878 FHN1YGR131W 525 nt5.96□□□□□ -1.46
VPS13Q07878 HSP12YFL014W 330 nt5.95□□□□□ -1.46
VPS13Q07878 YOR072WYOR072W 315 nt5.95□□□□□ -1.46
VPS13Q07878 GYP8YFL027C 1494 nt5.95□□□□□ -1.46
VPS13Q07878 YCL065WYCL065W 369 nt5.95□□□□□ -1.46
VPS13Q07878 PIN2YOR104W 849 nt5.95□□□□□ -1.46
VPS13Q07878 TRR1YDR353W 960 nt5.94□□□□□ -1.46
VPS13Q07878 BSC4YNL269W 396 nt5.94□□□□□ -1.46
VPS13Q07878 TFS1YLR178C 660 nt5.94□□□□□ -1.46
VPS13Q07878 FEX1YOR390W 1128 nt5.94□□□□□ -1.46
VPS13Q07878 FEX2YPL279C 1128 nt5.94□□□□□ -1.46
VPS13Q07878 FAA4YMR246W 2085 nt5.93□□□□□ -1.46
VPS13Q07878 MTR3YGR158C 753 nt5.93□□□□□ -1.46
VPS13Q07878 YBR124WYBR124W 360 nt5.93□□□□□ -1.46
VPS13Q07878 HBN1YCL026C-B 582 nt5.93□□□□□ -1.46
VPS13Q07878 PRE7YBL041W 726 nt5.93□□□□□ -1.46
VPS13Q07878 GUD1YDL238C 1470 nt5.92□□□□□ -1.46
VPS13Q07878 YEA6YEL006W 1008 nt5.92□□□□□ -1.46
VPS13Q07878 TAX4YJL083W 1815 nt5.92□□□□□ -1.46
VPS13Q07878 YJR107WYJR107W 987 nt5.92□□□□□ -1.46
VPS13Q07878 RHO4YKR055W 876 nt5.92□□□□□ -1.46
VPS13Q07878 YOL036WYOL036W 2286 nt5.92□□□□□ -1.46
VPS13Q07878 PDB1YBR221C 1101 nt5.92□□□□□ -1.46
VPS13Q07878 YEH2YLR020C 1617 nt5.92□□□□□ -1.46
VPS13Q07878 YGL088WYGL088W 366 nt5.91□□□□□ -1.46
VPS13Q07878 YGL235WYGL235W 537 nt5.9□□□□□ -1.46
VPS13Q07878 YHM2YMR241W 945 nt5.9□□□□□ -1.46
VPS13Q07878 ARC35YNR035C 1029 nt5.9□□□□□ -1.46
VPS13Q07878 TUB2YFL037W 1374 nt5.9□□□□□ -1.47
VPS13Q07878 ACF2YLR144C 2340 nt5.9□□□□□ -1.47
VPS13Q07878 YOR012WYOR012W 414 nt5.89□□□□□ -1.47
VPS13Q07878 PET112YBL080C 1626 nt5.89□□□□□ -1.47
VPS13Q07878 PIF1YML061C 2580 nt5.89□□□□□ -1.47
VPS13Q07878 PHO8YDR481C 1701 nt5.88□□□□□ -1.47
VPS13Q07878 KTR1YOR099W 1182 nt5.88□□□□□ -1.47
VPS13Q07878 MDL2YPL270W 2322 nt5.88□□□□□ -1.47
VPS13Q07878 LAS21YJL062W 2493 nt5.88□□□□□ -1.47
VPS13Q07878 PRP46YPL151C 1356 nt5.88□□□□□ -1.47
VPS13Q07878 GCD11YER025W 1584 nt5.88□□□□□ -1.47
VPS13Q07878 MCM3YEL032W 2916 nt5.88□□□□□ -1.47
VPS13Q07878 VPS70YJR126C 2436 nt5.88□□□□□ -1.47
VPS13Q07878 ERG4YGL012W 1422 nt5.87□□□□□ -1.47
VPS13Q07878 HEM3YDL205C 984 nt5.87□□□□□ -1.47
VPS13Q07878 YKR032WYKR032W 315 nt5.87□□□□□ -1.47
VPS13Q07878 RER2YBR002C 861 nt5.87□□□□□ -1.47
VPS13Q07878 GLE1YDL207W 1617 nt5.87□□□□□ -1.47
VPS13Q07878 ARN1YHL040C 1884 nt5.87□□□□□ -1.47
VPS13Q07878 YCR041WYCR041W 333 nt5.86□□□□□ -1.47
VPS13Q07878 PGA3YML125C 939 nt5.86□□□□□ -1.47
VPS13Q07878 SKN1YGR143W 2316 nt5.86□□□□□ -1.47
VPS13Q07878 SEC23YPR181C 2307 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms