Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 CDC13YDL220C 2775 nt6.94□□□□□ -1.3
HDA1P53973 APM4YOL062C 1476 nt6.93□□□□□ -1.3
HDA1P53973 GEF1YJR040W 2340 nt6.93□□□□□ -1.3
HDA1P53973 YEL068CYEL068C 333 nt6.93□□□□□ -1.3
HDA1P53973 DMA1YHR115C 1251 nt6.93□□□□□ -1.3
HDA1P53973 MEU1YLR017W 1014 nt6.93□□□□□ -1.3
HDA1P53973 AIM33YML087C 939 nt6.93□□□□□ -1.3
HDA1P53973 YPR114WYPR114W 948 nt6.93□□□□□ -1.3
HDA1P53973 MRI1YPR118W 1236 nt6.93□□□□□ -1.3
HDA1P53973 snR34snR34 203 nt6.93□□□□□ -1.3
HDA1P53973 ADE12YNL220W 1302 nt6.93□□□□□ -1.3
HDA1P53973 YOS9YDR057W 1629 nt6.93□□□□□ -1.3
HDA1P53973 YHC3YJL059W 1227 nt6.92□□□□□ -1.3
HDA1P53973 YJR115WYJR115W 510 nt6.92□□□□□ -1.3
HDA1P53973 DBR1YKL149C 1218 nt6.92□□□□□ -1.3
HDA1P53973 ASN2YGR124W 1719 nt6.92□□□□□ -1.3
HDA1P53973 ISY1YJR050W 708 nt6.91□□□□□ -1.3
HDA1P53973 DUS4YLR405W 1104 nt6.91□□□□□ -1.3
HDA1P53973 TSA1YML028W 591 nt6.91□□□□□ -1.3
HDA1P53973 MRPS16YPL013C 366 nt6.91□□□□□ -1.3
HDA1P53973 RSP5YER125W 2430 nt6.9□□□□□ -1.3
HDA1P53973 YLR126CYLR126C 756 nt6.9□□□□□ -1.3
HDA1P53973 CIN4YMR138W 576 nt6.9□□□□□ -1.3
HDA1P53973 PHA2YNL316C 1005 nt6.9□□□□□ -1.3
HDA1P53973 PYK2YOR347C 1521 nt6.9□□□□□ -1.31
HDA1P53973 WHI4YDL224C 1950 nt6.89□□□□□ -1.31
HDA1P53973 YDL022C-AYDL022C-A 249 nt6.89□□□□□ -1.31
HDA1P53973 EAF5YEL018W 840 nt6.89□□□□□ -1.31
HDA1P53973 PRS2YER099C 957 nt6.89□□□□□ -1.31
HDA1P53973 MMS2YGL087C 414 nt6.89□□□□□ -1.31
HDA1P53973 RAD24YER173W 1980 nt6.88□□□□□ -1.31
HDA1P53973 PRP40YKL012W 1752 nt6.88□□□□□ -1.31
HDA1P53973 COR1YBL045C 1374 nt6.88□□□□□ -1.31
HDA1P53973 GPI18YBR004C 1302 nt6.88□□□□□ -1.31
HDA1P53973 YGL235WYGL235W 537 nt6.88□□□□□ -1.31
HDA1P53973 YML012C-AYML012C-A 378 nt6.88□□□□□ -1.31
HDA1P53973 PRP2YNR011C 2631 nt6.88□□□□□ -1.31
HDA1P53973 RGT2YDL138W 2292 nt6.88□□□□□ -1.31
HDA1P53973 ISR1YPR106W 1332 nt6.87□□□□□ -1.31
HDA1P53973 SPO7YAL009W 780 nt6.87□□□□□ -1.31
HDA1P53973 SHP1YBL058W 1272 nt6.87□□□□□ -1.31
HDA1P53973 KKQ8YKL168C 2175 nt6.86□□□□□ -1.31
HDA1P53973 TEP1YNL128W 1305 nt6.86□□□□□ -1.31
HDA1P53973 HST3YOR025W 1344 nt6.86□□□□□ -1.31
HDA1P53973 DFM1YDR411C 1026 nt6.86□□□□□ -1.31
HDA1P53973 RRP46YGR095C 672 nt6.86□□□□□ -1.31
HDA1P53973 SEN34YAR008W 828 nt6.86□□□□□ -1.31
HDA1P53973 ATG4YNL223W 1485 nt6.85□□□□□ -1.31
HDA1P53973 SPC24YMR117C 642 nt6.85□□□□□ -1.31
HDA1P53973 YEN1YER041W 2280 nt6.85□□□□□ -1.31
HDA1P53973 PFK2YMR205C 2880 nt6.85□□□□□ -1.31
HDA1P53973 CLB4YLR210W 1383 nt6.84□□□□□ -1.31
HDA1P53973 UGX2YDL169C 672 nt6.84□□□□□ -1.31
HDA1P53973 DPH5YLR172C 903 nt6.84□□□□□ -1.31
HDA1P53973 YML083CYML083C 1257 nt6.84□□□□□ -1.31
HDA1P53973 TPO3YPR156C 1869 nt6.83□□□□□ -1.32
HDA1P53973 YDL129WYDL129W 876 nt6.83□□□□□ -1.32
HDA1P53973 ICS3YJL077C 396 nt6.83□□□□□ -1.32
HDA1P53973 SNN1YNL086W 309 nt6.83□□□□□ -1.32
HDA1P53973 YNL194CYNL194C 906 nt6.83□□□□□ -1.32
HDA1P53973 NMD5YJR132W 3147 nt6.83□□□□□ -1.32
HDA1P53973 YDR509WYDR509W 348 nt6.82□□□□□ -1.32
HDA1P53973 HAP3YBL021C 435 nt6.82□□□□□ -1.32
HDA1P53973 TIF34YMR146C 1044 nt6.82□□□□□ -1.32
HDA1P53973 HSM3YBR272C 1443 nt6.82□□□□□ -1.32
HDA1P53973 PKC1YBL105C 3456 nt6.82□□□□□ -1.32
HDA1P53973 ISN1YOR155C 1353 nt6.82□□□□□ -1.32
HDA1P53973 PET112YBL080C 1626 nt6.81□□□□□ -1.32
HDA1P53973 MTQ1YNL063W 945 nt6.81□□□□□ -1.32
HDA1P53973 FES1YBR101C 873 nt6.81□□□□□ -1.32
HDA1P53973 ATG12YBR217W 561 nt6.81□□□□□ -1.32
HDA1P53973 PHO3YBR092C 1404 nt6.81□□□□□ -1.32
HDA1P53973 MCM3YEL032W 2916 nt6.8□□□□□ -1.32
HDA1P53973 YCR006CYCR006C 474 nt6.8□□□□□ -1.32
HDA1P53973 GDA1YEL042W 1557 nt6.8□□□□□ -1.32
HDA1P53973 LEU5YHR002W 1074 nt6.8□□□□□ -1.32
HDA1P53973 BCY1YIL033C 1251 nt6.8□□□□□ -1.32
HDA1P53973 REX3YLR107W 1215 nt6.8□□□□□ -1.32
HDA1P53973 YET2YMR040W 483 nt6.8□□□□□ -1.32
HDA1P53973 MUM3YOR298W 1440 nt6.8□□□□□ -1.32
HDA1P53973 AFG1YEL052W 1530 nt6.8□□□□□ -1.32
HDA1P53973 GLN3YER040W 2193 nt6.79□□□□□ -1.32
HDA1P53973 GPA1YHR005C 1419 nt6.79□□□□□ -1.32
HDA1P53973 YGR291CYGR291C 222 nt6.79□□□□□ -1.32
HDA1P53973 EFM3YJR129C 1020 nt6.79□□□□□ -1.32
HDA1P53973 MSA2YKR077W 1092 nt6.79□□□□□ -1.32
HDA1P53973 SED5YLR026C 1023 nt6.79□□□□□ -1.32
HDA1P53973 UBC11YOR339C 471 nt6.79□□□□□ -1.32
HDA1P53973 ALG5YPL227C 1005 nt6.79□□□□□ -1.32
HDA1P53973 YBR298C-AYBR298C-A 222 nt6.79□□□□□ -1.32
HDA1P53973 FRS2YFL022C 1512 nt6.79□□□□□ -1.32
HDA1P53973 GLE1YDL207W 1617 nt6.79□□□□□ -1.32
HDA1P53973 GFA1YKL104C 2154 nt6.78□□□□□ -1.32
HDA1P53973 RPT3YDR394W 1287 nt6.78□□□□□ -1.32
HDA1P53973 PXL1YKR090W 2121 nt6.78□□□□□ -1.32
HDA1P53973 YPL168WYPL168W 1293 nt6.78□□□□□ -1.32
HDA1P53973 ARR1YPR199C 885 nt6.78□□□□□ -1.32
HDA1P53973 TOS2YGR221C 1869 nt6.78□□□□□ -1.32
HDA1P53973 SKY1YMR216C 2229 nt6.78□□□□□ -1.32
HDA1P53973 ASK1YKL052C 879 nt6.77□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms