Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC142381.3-201ENST00000568208 1670 ntBASIC20.9■□□□□ 0.94
CX3CR1P49238 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CX3CR1P49238 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
CX3CR1P49238 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CX3CR1P49238 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.9■□□□□ 0.94
CX3CR1P49238 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.9■□□□□ 0.94
CX3CR1P49238 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CX3CR1P49238 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CX3CR1P49238 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CX3CR1P49238 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CX3CR1P49238 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CX3CR1P49238 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CX3CR1P49238 AC093323.1-202ENST00000635031 2045 ntBASIC20.89■□□□□ 0.93
CX3CR1P49238 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CX3CR1P49238 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CX3CR1P49238 AC022211.4-201ENST00000625094 2161 ntBASIC20.89■□□□□ 0.93
CX3CR1P49238 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CX3CR1P49238 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
CX3CR1P49238 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CX3CR1P49238 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 MIR4449-201ENST00000578365 66 ntBASIC20.88■□□□□ 0.93
CX3CR1P49238 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.88■□□□□ 0.93
CX3CR1P49238 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CX3CR1P49238 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CX3CR1P49238 AC097639.1-201ENST00000565519 1891 ntBASIC20.88■□□□□ 0.93
CX3CR1P49238 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CX3CR1P49238 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CX3CR1P49238 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CX3CR1P49238 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CX3CR1P49238 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CX3CR1P49238 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CX3CR1P49238 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.86■□□□□ 0.93
CX3CR1P49238 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CX3CR1P49238 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.86■□□□□ 0.93
CX3CR1P49238 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CX3CR1P49238 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CX3CR1P49238 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CX3CR1P49238 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CX3CR1P49238 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CX3CR1P49238 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CX3CR1P49238 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CX3CR1P49238 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.85■□□□□ 0.93
CX3CR1P49238 RP9P-202ENST00000450133 1212 ntBASIC20.85■□□□□ 0.93
CX3CR1P49238 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.85■□□□□ 0.93
CX3CR1P49238 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CX3CR1P49238 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.85■□□□□ 0.93
CX3CR1P49238 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CX3CR1P49238 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CX3CR1P49238 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.93
CX3CR1P49238 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.83■□□□□ 0.93
CX3CR1P49238 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.83■□□□□ 0.93
CX3CR1P49238 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CX3CR1P49238 AC138932.3-201ENST00000567634 1902 ntBASIC20.82■□□□□ 0.92
CX3CR1P49238 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CX3CR1P49238 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 GPX1-201ENST00000419349 1106 ntBASIC20.82■□□□□ 0.92
CX3CR1P49238 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 AC093536.1-201ENST00000569153 554 ntBASIC20.82■□□□□ 0.92
CX3CR1P49238 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CX3CR1P49238 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CX3CR1P49238 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
CX3CR1P49238 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
CX3CR1P49238 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CX3CR1P49238 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.81■□□□□ 0.92
CX3CR1P49238 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
CX3CR1P49238 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.8■□□□□ 0.92
CX3CR1P49238 AC007029.1-201ENST00000604183 313 ntBASIC20.8■□□□□ 0.92
CX3CR1P49238 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.8■□□□□ 0.92
CX3CR1P49238 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CX3CR1P49238 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.79■□□□□ 0.92
CX3CR1P49238 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CX3CR1P49238 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CX3CR1P49238 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CX3CR1P49238 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CX3CR1P49238 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.79■□□□□ 0.92
CX3CR1P49238 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CX3CR1P49238 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.79■□□□□ 0.92
CX3CR1P49238 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms