Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 tG(GCC)BtG(GCC)B 71 nt5.71□□□□□ -1.5
LNP1P38878 SUF16tG(GCC)C 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)D1tG(GCC)D1 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)D2tG(GCC)D2 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)EtG(GCC)E 71 nt5.71□□□□□ -1.5
LNP1P38878 SUF20tG(GCC)F1 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)F2tG(GCC)F2 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)G1tG(GCC)G1 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)G2tG(GCC)G2 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)J1tG(GCC)J1 71 nt5.71□□□□□ -1.5
LNP1P38878 SUF23tG(GCC)J2 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)MtG(GCC)M 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)O1tG(GCC)O1 71 nt5.71□□□□□ -1.5
LNP1P38878 SUF17tG(GCC)O2 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)P1tG(GCC)P1 71 nt5.71□□□□□ -1.5
LNP1P38878 tG(GCC)P2tG(GCC)P2 71 nt5.71□□□□□ -1.5
LNP1P38878 DUS4YLR405W 1104 nt5.71□□□□□ -1.5
LNP1P38878 RPC19YNL113W 429 nt5.71□□□□□ -1.5
LNP1P38878 TMA46YOR091W 1038 nt5.71□□□□□ -1.5
LNP1P38878 HSP104YLL026W 2727 nt5.71□□□□□ -1.5
LNP1P38878 DEF1YKL054C 2217 nt5.71□□□□□ -1.5
LNP1P38878 WTM1YOR230W 1314 nt5.71□□□□□ -1.5
LNP1P38878 TIM22YDL217C 624 nt5.7□□□□□ -1.5
LNP1P38878 HED1YDR014W-A 489 nt5.7□□□□□ -1.5
LNP1P38878 AAD6YFL056C 639 nt5.7□□□□□ -1.5
LNP1P38878 YGR066CYGR066C 879 nt5.7□□□□□ -1.5
LNP1P38878 ATG36YJL185C 882 nt5.7□□□□□ -1.5
LNP1P38878 SNN1YNL086W 309 nt5.7□□□□□ -1.5
LNP1P38878 ARR1YPR199C 885 nt5.7□□□□□ -1.5
LNP1P38878 UTR2YEL040W 1404 nt5.7□□□□□ -1.5
LNP1P38878 NUP49YGL172W 1419 nt5.7□□□□□ -1.5
LNP1P38878 MSC3YLR219W 2187 nt5.7□□□□□ -1.5
LNP1P38878 RNR3YIL066C 2610 nt5.7□□□□□ -1.5
LNP1P38878 MMR1YLR190W 1476 nt5.7□□□□□ -1.5
LNP1P38878 PPM2YOL141W 2088 nt5.7□□□□□ -1.5
LNP1P38878 VPS72YDR485C 2388 nt5.7□□□□□ -1.5
LNP1P38878 MED2YDL005C 1296 nt5.69□□□□□ -1.5
LNP1P38878 GPI11YDR302W 660 nt5.69□□□□□ -1.5
LNP1P38878 YSC83YHR017W 1158 nt5.69□□□□□ -1.5
LNP1P38878 PML1YLR016C 615 nt5.69□□□□□ -1.5
LNP1P38878 MTF1YMR228W 1026 nt5.69□□□□□ -1.5
LNP1P38878 YOL035CYOL035C 303 nt5.69□□□□□ -1.5
LNP1P38878 PET20YPL159C 762 nt5.69□□□□□ -1.5
LNP1P38878 GUF1YLR289W 1938 nt5.69□□□□□ -1.5
LNP1P38878 ALT1YLR089C 1779 nt5.69□□□□□ -1.5
LNP1P38878 MIP1YOR330C 3765 nt5.69□□□□□ -1.5
LNP1P38878 TKL1YPR074C 2043 nt5.69□□□□□ -1.5
LNP1P38878 LPL1YOR059C 1353 nt5.68□□□□□ -1.5
LNP1P38878 ASN1YPR145W 1719 nt5.68□□□□□ -1.5
LNP1P38878 NTE1YML059C 5040 nt5.68□□□□□ -1.5
LNP1P38878 UPS3YDR185C 540 nt5.68□□□□□ -1.5
LNP1P38878 COX20YDR231C 618 nt5.68□□□□□ -1.5
LNP1P38878 RTN1YDR233C 888 nt5.68□□□□□ -1.5
LNP1P38878 NCS6YGL211W 1080 nt5.68□□□□□ -1.5
LNP1P38878 KRE9YJL174W 831 nt5.68□□□□□ -1.5
LNP1P38878 FBA1YKL060C 1080 nt5.68□□□□□ -1.5
LNP1P38878 SWD1YAR003W 1281 nt5.68□□□□□ -1.5
LNP1P38878 YGP1YNL160W 1065 nt5.68□□□□□ -1.5
LNP1P38878 ASR1YPR093C 867 nt5.68□□□□□ -1.5
LNP1P38878 STB5YHR178W 2232 nt5.68□□□□□ -1.5
LNP1P38878 YHR020WYHR020W 2067 nt5.68□□□□□ -1.5
LNP1P38878 CRP1YHR146W 1398 nt5.67□□□□□ -1.5
LNP1P38878 COX15YER141W 1461 nt5.67□□□□□ -1.5
LNP1P38878 PCL9YDL179W 915 nt5.67□□□□□ -1.5
LNP1P38878 CDC34YDR054C 888 nt5.67□□□□□ -1.5
LNP1P38878 PMP3YDR276C 168 nt5.67□□□□□ -1.5
LNP1P38878 REX3YLR107W 1215 nt5.67□□□□□ -1.5
LNP1P38878 POS5YPL188W 1245 nt5.67□□□□□ -1.5
LNP1P38878 YBR113WYBR113W 483 nt5.67□□□□□ -1.5
LNP1P38878 EDE1YBL047C 4146 nt5.66□□□□□ -1.5
LNP1P38878 COX9YDL067C 180 nt5.66□□□□□ -1.5
LNP1P38878 RAM1YDL090C 1296 nt5.66□□□□□ -1.5
LNP1P38878 RPP1YHR062C 882 nt5.66□□□□□ -1.5
LNP1P38878 HOC1YJR075W 1191 nt5.66□□□□□ -1.5
LNP1P38878 YBR027CYBR027C 333 nt5.66□□□□□ -1.5
LNP1P38878 SCP1YOR367W 603 nt5.66□□□□□ -1.5
LNP1P38878 SEC62YPL094C 825 nt5.66□□□□□ -1.5
LNP1P38878 RPO26YPR187W 468 nt5.66□□□□□ -1.5
LNP1P38878 ECM7YLR443W 1347 nt5.66□□□□□ -1.5
LNP1P38878 PAF1YBR279W 1338 nt5.66□□□□□ -1.5
LNP1P38878 FLC3YGL139W 2409 nt5.66□□□□□ -1.5
LNP1P38878 YDR514CYDR514C 1452 nt5.65□□□□□ -1.5
LNP1P38878 LSM6YDR378C 261 nt5.65□□□□□ -1.5
LNP1P38878 GAL83YER027C 1254 nt5.65□□□□□ -1.5
LNP1P38878 LIA1YJR070C 978 nt5.65□□□□□ -1.5
LNP1P38878 PPA2YMR267W 933 nt5.65□□□□□ -1.5
LNP1P38878 YPL014WYPL014W 1146 nt5.65□□□□□ -1.5
LNP1P38878 CCC2YDR270W 3015 nt5.65□□□□□ -1.51
LNP1P38878 MST1YKL194C 1389 nt5.65□□□□□ -1.51
LNP1P38878 YML133CYML133C 4125 nt5.65□□□□□ -1.51
LNP1P38878 THI2YBR240C 1353 nt5.65□□□□□ -1.51
LNP1P38878 CRF1YDR223W 1404 nt5.65□□□□□ -1.51
LNP1P38878 GPD1YDL022W 1176 nt5.64□□□□□ -1.51
LNP1P38878 MFA2YNL145W 117 nt5.64□□□□□ -1.51
LNP1P38878 YIR007WYIR007W 2295 nt5.64□□□□□ -1.51
LNP1P38878 ATG7YHR171W 1893 nt5.64□□□□□ -1.51
LNP1P38878 MCM6YGL201C 3054 nt5.63□□□□□ -1.51
LNP1P38878 MIA40YKL195W 1212 nt5.63□□□□□ -1.51
LNP1P38878 MRPS12YNR036C 462 nt5.63□□□□□ -1.51
LNP1P38878 IVY1YDR229W 1362 nt5.63□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms