Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM18P0DKX4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM18P0DKX4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMIM18P0DKX4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMIM18P0DKX4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM18P0DKX4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
SMIM18P0DKX4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM18P0DKX4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM18P0DKX4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM18P0DKX4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM18P0DKX4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SMIM18P0DKX4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM18P0DKX4 AC004812.2-201ENST00000611079 2094 ntBASIC21.93■■□□□ 1.1
SMIM18P0DKX4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM18P0DKX4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMIM18P0DKX4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM18P0DKX4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM18P0DKX4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM18P0DKX4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM18P0DKX4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM18P0DKX4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM18P0DKX4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
SMIM18P0DKX4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.89■■□□□ 1.09
SMIM18P0DKX4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM18P0DKX4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.89■■□□□ 1.09
SMIM18P0DKX4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.89■■□□□ 1.09
SMIM18P0DKX4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM18P0DKX4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM18P0DKX4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 ZNRF2P1-201ENST00000441407 443 ntBASIC21.87■■□□□ 1.09
SMIM18P0DKX4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM18P0DKX4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 AC233723.2-201ENST00000623798 2106 ntBASIC21.86■■□□□ 1.09
SMIM18P0DKX4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM18P0DKX4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM18P0DKX4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM18P0DKX4 C1orf229-201ENST00000623686 2258 ntBASIC21.85■■□□□ 1.09
SMIM18P0DKX4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.85■■□□□ 1.09
SMIM18P0DKX4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.85■■□□□ 1.09
SMIM18P0DKX4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMIM18P0DKX4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMIM18P0DKX4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms