Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 CIR1YGR207C 786 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 YGR270C-AYGR270C-A 219 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 YKL169CYKL169C 384 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 ERG27YLR100W 1044 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 YLR280CYLR280C 351 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 YNL013CYNL013C 378 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 NOP13YNL175C 1212 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 RFC4YOL094C 972 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 RPB8YOR224C 441 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 YBR219CYBR219C 384 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 LEU9YOR108W 1815 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 ICL2YPR006C 1728 nt7.86□□□□□ -1.15
TY1A-PR2P0CX60 BUD9YGR041W 1644 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 snR83snR83 306 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 IPK1YDR315C 846 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 IRC7YFR055W 1023 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 YGR115CYGR115C 780 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 LIN1YHR156C 1023 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 NVJ1YHR195W 966 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 SDH3YKL141W 597 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 MRP49YKL167C 414 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 IRC11YOR013W 471 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 OYE3YPL171C 1203 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 RRT2YBR246W 1164 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 SRM1YGL097W 1449 nt7.85□□□□□ -1.15
TY1A-PR2P0CX60 UBA4YHR111W 1323 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 YNL011CYNL011C 1335 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 YPT31YER031C 672 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 CTR2YHR175W 570 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 DID4YKL002W 699 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 SPP2YOR148C 558 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 YPL102CYPL102C 303 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 YBR255C-AYBR255C-A 363 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 SGV1YPR161C 1974 nt7.84□□□□□ -1.15
TY1A-PR2P0CX60 TOK1YJL093C 2076 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 FLR1YBR008C 1647 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 YDR118W-AYDR118W-A 117 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 PFA5YDR459C 1125 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 YIL163CYIL163C 354 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 YLR349WYLR349W 507 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 RBD2YPL246C 789 nt7.83□□□□□ -1.16
TY1A-PR2P0CX60 PTR2YKR093W 1806 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 KEG1YFR042W 603 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 YHR180WYHR180W 492 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 SNN1YNL086W 309 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 DUG3YNL191W 1074 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 ELA1YNL230C 1140 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 AGP3YFL055W 1677 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 TAF8YML114C 1533 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 SAM3YPL274W 1764 nt7.82□□□□□ -1.16
TY1A-PR2P0CX60 MTH1YDR277C 1302 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 DRS1YLL008W 2259 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 snR63snR63 255 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 YFL012W-AYFL012W-A 375 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 PET8YNL003C 855 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 YNL050CYNL050C 813 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 HUA2YOR284W 732 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 NBA1YOL070C 1506 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 BCS1YDR375C 1371 nt7.81□□□□□ -1.16
TY1A-PR2P0CX60 YLR446WYLR446W 1302 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YPR196WYPR196W 1413 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 TRR1YDR353W 960 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 RSM28YDR494W 1086 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YGR226CYGR226C 210 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YGR273CYGR273C 525 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 PRE3YJL001W 648 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YLR264C-AYLR264C-A 117 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 STP3YLR375W 1032 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YPL199CYPL199C 723 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 ITT1YML068W 1395 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 DIG1YPL049C 1359 nt7.8□□□□□ -1.16
TY1A-PR2P0CX60 YCR001WYCR001W 315 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 SKI8YGL213C 1194 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 YGR042WYGR042W 816 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 YIL115W-AYIL115W-A 372 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 YJR142WYJR142W 1029 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 YOR238WYOR238W 912 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 YPL251WYPL251W 303 nt7.79□□□□□ -1.16
TY1A-PR2P0CX60 WTM2YOR229W 1404 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 YPS3YLR121C 1527 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 CHO1YER026C 831 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 SBA1YKL117W 651 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 SHB17YKR043C 816 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 MAP1YLR244C 1164 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 KTR1YOR099W 1182 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 ARO4YBR249C 1113 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 BPL1YDL141W 2073 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 ATG18YFR021W 1503 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 YIL001WYIL001W 1542 nt7.78□□□□□ -1.16
TY1A-PR2P0CX60 IES1YFL013C 2079 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 PLP1YDR183W 693 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 YGR204C-AYGR204C-A 114 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 SER2YGR208W 930 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 PEX18YHR160C 852 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 BET4YJL031C 984 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 APQ13YJL075C 417 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 CDC11YJR076C 1248 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 CWP2YKL096W-A 279 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 TEX1YNL253W 1269 nt7.77□□□□□ -1.17
TY1A-PR2P0CX60 TOM6YOR045W 186 nt7.77□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 77.9 ms