Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC010980.1-201ENST00000587192 1142 ntBASIC28.94■■■□□ 2.22
CHGBP05060 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHGBP05060 DUSP8P4-201ENST00000399538 1761 ntBASIC28.93■■■□□ 2.22
CHGBP05060 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHGBP05060 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CHGBP05060 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.92■■■□□ 2.22
CHGBP05060 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHGBP05060 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.91■■■□□ 2.22
CHGBP05060 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.91■■■□□ 2.22
CHGBP05060 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHGBP05060 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.9■■■□□ 2.22
CHGBP05060 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CHGBP05060 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.9■■■□□ 2.22
CHGBP05060 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.9■■■□□ 2.22
CHGBP05060 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHGBP05060 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHGBP05060 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CHGBP05060 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.89■■■□□ 2.22
CHGBP05060 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.89■■■□□ 2.22
CHGBP05060 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CHGBP05060 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHGBP05060 RPS2P7-201ENST00000447334 885 ntBASIC28.89■■■□□ 2.22
CHGBP05060 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.89■■■□□ 2.22
CHGBP05060 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.89■■■□□ 2.22
CHGBP05060 AC145676.1-201ENST00000514988 2004 ntBASIC28.89■■■□□ 2.21
CHGBP05060 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CHGBP05060 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHGBP05060 AC087393.1-201ENST00000582896 145 ntBASIC28.88■■■□□ 2.21
CHGBP05060 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.87■■■□□ 2.21
CHGBP05060 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHGBP05060 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHGBP05060 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHGBP05060 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHGBP05060 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CHGBP05060 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHGBP05060 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
CHGBP05060 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHGBP05060 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
CHGBP05060 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHGBP05060 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.85■■■□□ 2.21
CHGBP05060 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHGBP05060 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.85■■■□□ 2.21
CHGBP05060 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHGBP05060 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHGBP05060 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.84■■■□□ 2.21
CHGBP05060 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHGBP05060 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.84■■■□□ 2.21
CHGBP05060 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHGBP05060 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHGBP05060 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHGBP05060 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CHGBP05060 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHGBP05060 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHGBP05060 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.82■■■□□ 2.2
CHGBP05060 BHLHE23-202ENST00000612929 1109 ntBASIC28.82■■■□□ 2.2
CHGBP05060 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.82■■■□□ 2.2
CHGBP05060 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CHGBP05060 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.82■■■□□ 2.2
CHGBP05060 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHGBP05060 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHGBP05060 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHGBP05060 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHGBP05060 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHGBP05060 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.81■■■□□ 2.2
CHGBP05060 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHGBP05060 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.81■■■□□ 2.2
CHGBP05060 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHGBP05060 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHGBP05060 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHGBP05060 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHGBP05060 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHGBP05060 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.79■■■□□ 2.2
CHGBP05060 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.79■■■□□ 2.2
CHGBP05060 AC103834.1-201ENST00000520383 144 ntBASIC28.79■■■□□ 2.2
CHGBP05060 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
CHGBP05060 KRT8P33-201ENST00000508125 1423 ntBASIC28.78■■■□□ 2.2
CHGBP05060 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
CHGBP05060 LONRF2P2-201ENST00000439212 571 ntBASIC28.78■■■□□ 2.2
CHGBP05060 AC139795.1-202ENST00000500444 432 ntBASIC28.78■■■□□ 2.2
CHGBP05060 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.78■■■□□ 2.2
CHGBP05060 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.78■■■□□ 2.2
CHGBP05060 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHGBP05060 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.77■■■□□ 2.2
CHGBP05060 RARRES2P1-201ENST00000474487 481 ntBASIC28.77■■■□□ 2.2
CHGBP05060 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.77■■■□□ 2.2
CHGBP05060 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.77■■■□□ 2.2
CHGBP05060 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHGBP05060 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.76■■■□□ 2.2
CHGBP05060 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHGBP05060 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHGBP05060 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.76■■■□□ 2.19
CHGBP05060 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CHGBP05060 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms