Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.68■■□□□ 1.54
TSPAN3O60637 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TSPAN3O60637 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN3O60637 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN3O60637 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TSPAN3O60637 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN3O60637 MIR4508-201ENST00000584178 70 ntBASIC24.67■■□□□ 1.54
TSPAN3O60637 AL451085.2-201ENST00000605085 799 ntBASIC24.67■■□□□ 1.54
TSPAN3O60637 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.67■■□□□ 1.54
TSPAN3O60637 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.66■■□□□ 1.54
TSPAN3O60637 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TSPAN3O60637 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.66■■□□□ 1.54
TSPAN3O60637 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.66■■□□□ 1.54
TSPAN3O60637 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN3O60637 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN3O60637 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.65■■□□□ 1.54
TSPAN3O60637 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN3O60637 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN3O60637 AC019171.1-201ENST00000601251 1056 ntBASIC24.65■■□□□ 1.54
TSPAN3O60637 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN3O60637 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
TSPAN3O60637 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.65■■□□□ 1.54
TSPAN3O60637 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
TSPAN3O60637 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TSPAN3O60637 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
TSPAN3O60637 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.64■■□□□ 1.54
TSPAN3O60637 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
TSPAN3O60637 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TSPAN3O60637 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TSPAN3O60637 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
TSPAN3O60637 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN3O60637 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.63■■□□□ 1.53
TSPAN3O60637 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN3O60637 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.63■■□□□ 1.53
TSPAN3O60637 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.63■■□□□ 1.53
TSPAN3O60637 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN3O60637 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN3O60637 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN3O60637 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN3O60637 AC103724.3-201ENST00000564481 992 ntBASIC24.62■■□□□ 1.53
TSPAN3O60637 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.62■■□□□ 1.53
TSPAN3O60637 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.62■■□□□ 1.53
TSPAN3O60637 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN3O60637 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN3O60637 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.61■■□□□ 1.53
TSPAN3O60637 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.61■■□□□ 1.53
TSPAN3O60637 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.61■■□□□ 1.53
TSPAN3O60637 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.61■■□□□ 1.53
TSPAN3O60637 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.61■■□□□ 1.53
TSPAN3O60637 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.61■■□□□ 1.53
TSPAN3O60637 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TSPAN3O60637 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN3O60637 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN3O60637 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN3O60637 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.6■■□□□ 1.53
TSPAN3O60637 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TSPAN3O60637 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TSPAN3O60637 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN3O60637 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN3O60637 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN3O60637 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
TSPAN3O60637 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN3O60637 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
TSPAN3O60637 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.59■■□□□ 1.53
TSPAN3O60637 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
TSPAN3O60637 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
TSPAN3O60637 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN3O60637 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.57■■□□□ 1.52
TSPAN3O60637 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TSPAN3O60637 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
TSPAN3O60637 AC096887.2-201ENST00000623443 1957 ntBASIC24.56■■□□□ 1.52
TSPAN3O60637 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TSPAN3O60637 AC092803.2-201ENST00000564287 1899 ntBASIC24.56■■□□□ 1.52
TSPAN3O60637 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TSPAN3O60637 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TSPAN3O60637 AL031848.2-201ENST00000607670 837 ntBASIC24.56■■□□□ 1.52
TSPAN3O60637 AL035685.1-201ENST00000636663 812 ntBASIC24.56■■□□□ 1.52
TSPAN3O60637 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
TSPAN3O60637 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
TSPAN3O60637 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN3O60637 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN3O60637 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.55■■□□□ 1.52
TSPAN3O60637 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TSPAN3O60637 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms