Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHISA3A0PJX4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHISA3A0PJX4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SHISA3A0PJX4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
SHISA3A0PJX4 MIR3665-201ENST00000578708 105 ntBASIC20.89■□□□□ 0.93
SHISA3A0PJX4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHISA3A0PJX4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHISA3A0PJX4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHISA3A0PJX4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA3A0PJX4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA3A0PJX4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA3A0PJX4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA3A0PJX4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHISA3A0PJX4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.86■□□□□ 0.93
SHISA3A0PJX4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 AC079834.2-201ENST00000609776 1949 ntBASIC20.85■□□□□ 0.93
SHISA3A0PJX4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHISA3A0PJX4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHISA3A0PJX4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHISA3A0PJX4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHISA3A0PJX4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHISA3A0PJX4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHISA3A0PJX4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.83■□□□□ 0.93
SHISA3A0PJX4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.83■□□□□ 0.92
SHISA3A0PJX4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHISA3A0PJX4 AC004812.2-201ENST00000611079 2094 ntBASIC20.82■□□□□ 0.92
SHISA3A0PJX4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHISA3A0PJX4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHISA3A0PJX4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SHISA3A0PJX4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHISA3A0PJX4 AC087741.3-201ENST00000624270 1347 ntBASIC20.8■□□□□ 0.92
SHISA3A0PJX4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHISA3A0PJX4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 AL359504.2-201ENST00000605506 1601 ntBASIC20.79■□□□□ 0.92
SHISA3A0PJX4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHISA3A0PJX4 C9orf163-202ENST00000624034 2573 ntBASIC20.79■□□□□ 0.92
SHISA3A0PJX4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 AC141586.4-201ENST00000624558 1573 ntBASIC20.78■□□□□ 0.92
SHISA3A0PJX4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHISA3A0PJX4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHISA3A0PJX4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHISA3A0PJX4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHISA3A0PJX4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHISA3A0PJX4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHISA3A0PJX4 AC021231.2-201ENST00000594613 730 ntBASIC20.76■□□□□ 0.91
SHISA3A0PJX4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.76■□□□□ 0.91
SHISA3A0PJX4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms