Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-6A0A0B4J262 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-6A0A0B4J262 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 AC008813.1-201ENST00000536597 885 ntBASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 AC092803.2-201ENST00000564287 1899 ntBASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-6A0A0B4J262 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 PKD1P6-201ENST00000343738 4769 ntBASIC17.33■□□□□ 0.36
TRAV8-6A0A0B4J262 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-6A0A0B4J262 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 ERN1-208ENST00000606895 2068 ntBASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-6A0A0B4J262 AC018358.1-201ENST00000631079 1402 ntBASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-6A0A0B4J262 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 MIR3648-2-201ENST00000581792 180 ntBASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 MIR3648-1-201ENST00000615959 180 ntBASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-6A0A0B4J262 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-6A0A0B4J262 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms